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*: recursive bump for jpeg -> libjpeg-turbo switch
*: recursive bump for default Kerberos implementation switch
*: recursive bump for icu 77 and libxml2 2.14
*: Recursive revbump from audio/flac-1.5.0
octave: updated to 9.4.0 Summary of bugs fixed for version 9.4.0 (2025-02-05): Improvements and fixes - Fix error in calculation of file timestamp on Windows. GUI - Update Spanish translation file. - Update Brazilian Portuguese translation file. Build system / Tests - `cellfun`: Add test for function failing to return requested output - `arrayfun`: Add test for function failing to return requested output Documentation - Clarify default editor difference between CLI and GUI.
octave: updated to 9.3.0 Summary of bugs fixed for version 9.3.0 (2024-12-12): Improvements and fixes - `jupyter-notebook`: Avoid error if evaluated code closes an existing figure window. Use `unwind_protect` block to ensure figure and tempfile cleanup actions occur - `uitable`: Fix updating value with combo box selection - `movfun`: Correct output shape of n-D arrays when operating on dimensions higher than 2. This will affect all moving window functions (`movmad`, `movmax`, `movmean`, `movmedian`, `movmin`, `movprod`, `movstd`, `movsum`, and `movvar`) - `movvar` and `movstd`: Use correct default value of 0 if an empty array is specified for `opt` to maintain consistent behavior with `var` and `std`. Improve input validation to ensure `opt` is one of 0, 1, or []. - `fopen`: Convert identifier for locale charset to lower-case characters - `regexp`: Avoid integer underflow with unsigned integers. - `interp2`: Provide a meaningful error message if the input reference array is a vector - `struct2hdl.m`: Do not delete previously added axes children - `print`: Fix regression in pdf fonts - `legend` icons now inherit the "facelalpha" property to match appearance of patch and surface graphics objects - `barh` properties now better match equivalent `bar` plot. Changing `horizontal` property for a bar or barh plot now consistently updates properties to match redrawn plot - Tick mark labels are now correctly updated after changing x or y data for `bar` and `barh` plots - `hdl2struct.m`: Fix missing legend markers - Enable FLTK graphics toolkit on macOS if not multi-threaded - Do not execute PKG_ADD script in current directory GUI - Update Brazilian Portugese translation file - Fix some missing white spaces in documentation viewer Build system / Tests - `jupyter-notebook` test no longer fails if a figure window is open - `movmad`, `movmax`, `movmean`, `movmedian`, `movmin`, `movprod`, `movslice`, `movstd`, `movsum`, `movvar`: Add BISTs for general function operation. - `interp2`, `interp3`, `interpn`: Add more tests for non-numeric inputs - Update formatting of movXXX functions. Documentation - `load`: Correct documentation of `-v7.3` and `-hdf5` options - `interp2`, `interp3`, `interpn`: Specify that inputs need to be numeric - `error`: Document the `ID` argument - `sqp`: Clarify size requirements of input arguments `lb` and `ub` - Eliminate double period at end of "mode" graphics property documentation. - Fix makeinfo errors for comment block keywords
*: recursive bump for icu 76 shlib major version bump
*: revbump for icu downgrade
*: recursive bump for icu 76.1 shlib bump
octave: use pcre2 rather than end-of-life pcre
octave: updated to 9.2.0
Summary of bugs fixed for version 9.2.0 (2024-06-01):
Improvements and fixes
- `hist.m`: Add input validation for `Y` restricting it to 2-D array.
Avoid error when `Y` value range is very small.
- `cross.m`: Add input validation for `dim` restricting it to a numeric
integer valued scalar.
- `getframe.m`: Respect pixel ratio (high DPI) of screen with figure.
- `legend.m`: Fix error if root property `"showhiddenhandles"` is `"on"`
- `savepath.m`: Correctly handle packages without binaries.
- Correctly scale figure position on screen with DPI scaling (high DPI).
- `profile ('on')` now clears any existing profile data as the documentation
states.
- Fix segmentation fault when trying to set breakpoint in non-existent method
of `classdef` class.
- Improve default display of `classdef` properties.
- Avoid crash with Qt6 6.7.0.
- `bar.m`: Catch input number validation error.
- Prevent OOM crash or segmentation fault in `sort ()` when `dim` equals `Inf`.
- `legend.m`: Avoid setting more colors than coordinates for `patch` objects.
- `inputParser.m`: Allow default classdef objects which overload `struct`.
- Preserve `"position"` property of figure when object is `reset()`.
- `hist.m`: Avoid error when `y` value range is very small.
- `barh`: Add input validation check for `nargin < 1`.
GUI
- Use first word for options in right-click menu of command window widget
.
- Set `DontUseNativeDialog` flag as first property in `QFileDialog`.
- Explicitly raise non-modal message boxes ensuring visibility.
- Save and restore splitter state of documentation widget.
- Allow executing new files from built-in editor with F5.
- Allow unbinding GUI shortcuts.
- Fix restoring headers in file browser and workspace view.
- File dialogs of the built-in editor are now modal.
- Fix dragging editor from main window into floating state.
Build system / Tests
- Avoid overriding `save_*` variables from outer scope.
This fixes an error that might have lead to overlinking of shared libraries
(e.g., `.oct` files). Consider rebuilding shared libraries that have been
built with Octave 9.1.0.
- Add BIST for `is_valid_file_id.m`.
- Update metainfo.xml with new fields for AppStream 1.0.
- Show result of check for `std::pmr::polymorphic_allocator` in configure
summary.
- Run test program for polymorphic allocators if possible instead of a simple
build check.
- Speed up BIST for the central part of `convn` with `'full'` shape.
- Require Qt Widgets module when building the GUI.
- `bug-53027.tst`: Delete temporary file after test is done.
- Avoid build error with GCC 14 when targeting Windows.
- Try to clean up after BIST also in case test failed.
- `bar.m`, `barh.m`: Add plotting BISTs.
- Check if C and Fortran compilers accept `-fexceptions` flag.
This affects building Octave itself from sources and also how .mex or .oct
files are built by `mex` and `mkoctfile`.
Documentation
- Describe shape of outputs for `hist`.
- Simplify programming notes for `patch` objects.
- `vecnorm.m`: Add missing parenthesis to equation in docstring.
- Add example to Minimizers section on using anonymous functions to pass
additional arguments to functions called by minimizer functions
(`fminsearch`, `fminbnd`, `fminunc`).
- Add application notes in `fminsearch`, `fminbnd`, `fminunc` indicating the
preferred way to pass parameters is through anonymous functions.
- Update remaining copyright statements to 2024.
- Minor fix for `setappdata.m`.
- Section "Assignment Expressions": Use `@emph` rather than `@i` macro for
better rendering in plaintext formats.
- Section "Running Octave": Tell new users how to start Octave on their
computers.
- `tsearch`: Add programming note about expected performance.
Deprecated functions, properties, and operators
- `fminsearch` parameter passing: A legacy, undocumented, and only partially
supported syntax for passing parameters to the minimized function `fcn`
called by `fminsearch` by appending them to the input argument list has
functioned intermittently since Octave 4.4.0. Due to conflicts with other
compatibility-required input methods the documentation of this syntax was
removed in Octave 5.1.0, and the remaining functionality will be completely
removed in Octave 10. The preferred method of passing parameters to any of
the minimization functions (including `fminsearch`, `fminbnd`, and `fminunc`)
is through the use of anonymous functions. Specific examples of this can be
found in the "Minimizers" section of the GNU Octave manual.
revbump after icu and protobuf updates
*: recursive bump for gnutls p11-kit option (existing installations need the bl3.mk included, but it's now only optionally included)
*: Revision bumps for ncurses 6.5 overhaul.
* recursive bump for libxkbcommon 1.7.0 Marc Baudoin reported problems with using old binary packages with the new libkxbcommon, so force everything to 1.7.0
octave: updated to 9.1.0 Octave 9.1.0 This major release improves the graphics backend, compatibility with Matlab and contains many new and improved functions. A list of important user-visible changes is available by selecting the Release Notes item in the News menu of the GUI or by typing news at the Octave command prompt.
*: Recursive revbump from audio/pulseaudio-17.0
octave: updated to 8.4.0 8.4.0 Improvements and fixes mkoctfile: Skip parsing for less flags Fix getting number of non-zero elements in SuiteSparse matrices. delaunayn: Avoid erroneous simplex removal for integer inputs delaunayn: Add precision loss warning for large int inputs delaunayn: Also warn for negative integers with large magnitude Correctly load all-zero sparse matrices from text files Allocate correct storage for interleaved complex mxArray objects mkoctfile: Prefer parsing over passing on argument after unknown argument fft: Avoid segmentation fault with ND-arrays fft: Avoid overwriting input for inplace operations intersect.m: Correct third output with "stable" flag Avoid use-after-free issue in parser betainc.m: Improve integer input logic and validation webread: Apply timeout also for initial connection Build system / Tests mkpp.m: Remove stray text causing error with demo code. Ensure that new test for saving sparse matrices writes a text file. Search for tests in and install octave-value template sources Documentation Correct variable name typo in documentation of slice(). Expand documentation for gcd() and lcm(). datevec: Clarify that heuristics are used to detect the format of a date string datenum: Add help text that inputs can be arrays, add examples datevec: Add help text that inputs can be arrays Describe various pitfalls with floating point ranges Add range example and some copyedits.
*: revebump for new brotli option for freetype2 Addresses PR 57693
*: recursive bump for icu 74.1
*: bump for openssl 3
recursive revbump for tiff update
octave: updated to 8.3.0
Version 8.3.0
Improvements and fixes
undo_string_escapes: Return '\0' for NUL byte input
Stop excessive memory usage for minor grid ticks
Include needed headers in installed .cc files
Fix floating point exception when sparse array reshaped to 0x0
unicode2native: Fix conversion to UTF-16
memory: Fix execution on Cygwin.
uniconv-wrappers: Avoid freeing uninitialized pointer
lo-regexp.cc: Only include PCRE2/PCRE headers if feature test succeeded
Fix segfault when saveobj() used with old-style class files
Fix restoring breakpoints from dbstatus breakpoint structure
colorbar.m: Fix undefined variable d
Reset all axes properties except 'Units' and 'Position' with cla ('reset').
unicode2native.m: Restore support for one input parameter
native2unicode, unicode2native: Support empty second argument
fullfile.m: Return empty cell for input with empty cell
audioplayer.m: Emit error if input data Y is empty
Remove obsolete callback constructor code for @audioplayer and @audiorecorder
Avoid false detection of “non-real pivot” in ichol()
Fix building against SuiteSparse 7.1.0 when SPQR is disabled
ellipsoid.m: Avoid returning geometry data unless it is explicitly requested to avoid overwriting ans.
subsasgn: Avoid panic on invalid field names
lex.ll: Remove $ as a valid character for identifiers.
fileparts.m: Allow for relative path on different drive on Windows
datevec.m: Add some ISO 8601 conform formats
Build system / Tests
betaincinv.m: Slightly increase test tolerance (for macOS 13).
colorbar.m: Add tests
sparse-qr.cc: Fix compatibility with SuiteSparse 7.1.0 / CXSparse 4.0.4.
pcg.m: Use eps tolerance in test for ishermitian
fileparts.m: Overhaul BISTs.
Documentation
Return documentation for help properties
Add note to isprime.m on inputs over 2^64.
Mass-change BUILD_DEPENDS to TOOL_DEPENDS outside mk/. Almost all uses, if not all of them, are wrong, according to the semantics of BUILD_DEPENDS (packages built for target available for use _by_ tools at build-time) and TOOL_DEPEPNDS (packages built for host available for use _as_ tools at build-time). No change to BUILD_DEPENDS as used correctly inside buildlink3. As proposed on tech-pkg: https://mail-index.netbsd.org/tech-pkg/2023/06/03/msg027632.html
octave: updated to 8.2.0
Summary of bugs fixed for version 8.2.0 (2023-04-13):
----------------------------------------------------
### Improvements and fixes
- `pr-output.cc`: Fix output for `format native-bit`
- Fix evaluation of `&` and `|` expressions in conditional contexts (bug
#63935).
- Avoid clang warning about very unlikely buffer overflow.
- `mpoles.m`: Overhaul function and use absolute tolerance for zero poles
- `perms.m`: Change `"unique"` output order to reverse lexicographic to
match non-unique order
- Remove trailing `'\r'` from curl dir list
- `fopen`: Use "UTF-8" as default encoding for `fopen`
- Don't use encoding facet when writing bytes to stream
- `fopen`, `unicode2native`: Fix converting the encoding of short char
arrays with invalid UTF-8
- `fopen`: Try to gather complete UTF-8 surrogates when converting
encoding
- Fix display of scalar complex variables with mixed `Inf`/`NaN` and
floating point values
- `fopen`: Do not convert encoding for file streams with libc++
### GUI
- Speedup loading and saving preferences dialog
### Build system / Tests
- `inpolygon.m`: Fix demo code
- `if.tst`: New test for bug #63935.
- `acinclude.m4`: Correct typo in `#define PCRE2_CODE_UNIT_WIDTH`.
- `lu`: Add self-test with complex valued input.
- Disable visibility flags by default
- Check whether using STL from LLVM or Apple
### Documentation
- Improve documentation for `linspace` and `logspace` functions.
- Correct and improve documentation for `sparse()` function.
Summary of important user-visible changes for version 8 (2023-03-07):
--------------------------------------------------------------------
### General improvements
- Octave's libraries are now built using symbol visibility by default.
That means that fewer symbols are exported from these libraries.
Configure with `--disable-lib-visibility-flags` to export all symbols
(as in previous versions).
- `filter` is now 5X faster, which also speeds up `deconv`, `fftfilt`
and `arma_rnd` by the same amount.
- `integral` can now return a second argument containing the error
estimate from the underlying integrator.
- `perms` now accepts a second argument "unique" to return only unique
permutations for inputs with repeated elements. It is faster and
takes less memory to call `perms ('aaaabbbbcccc', "unique")` than to
call `unique (perms ('aaaabbbbcccc'), "rows")`.
- `quadgk` can now accept the `ArrayValued` input parameter to handle
array-valued input functions.
- `delaunayn` now has consistent trivial simplex checking and removal
for all input dimensions, simplex checking 3D inputs is now
vectorized, and >3D simplex checking performance has been improved.
Simplexes points are now ordered so they will all have positive
outward normal vectors. Input type checking has also been added for
improved error handling.
- `factor` now factorizes all 64-bit integers in roughly the same time.
Previously, the product of two large primes took much longer to factorize
than highly composite inputs.
- `Refine` option is now implemented in functions `ode45`, `ode23`,
and `ode23s`.
- Octave is now compatible with PCRE2 (UTF-8). PCRE2 is preferred over PCRE
if both are installed. Configure with `--without-pcre2` if you prefer Octave
to use PCRE in this case.
- `mean` now internally processes data as type double to reduce likelihood of
hitting overflow or precision limits with other types
### Graphical User Interface
- The GUI has a dark style and several new icons in toolbars for better
visibility and higher contrast.
- A new terminal widget has been added for the GUI. It is still experimental
and is disabled by default. It can be enabled with the command line
parameter `--experimental-terminal-widget`.
- More fonts for the documentation browser are included.
### Graphics backend
- When printing, the option `-svgconvert` is now the default. If you want to
use the more limited EPS-based tool chain (the former default)—e.g., if
you encounter inaccurate image rendering—you can pass the `-nosvgconvert`
option to the `print` function.
- Additional properties have been added to the `figure` graphics object:
* `"innerposition"` (equivalent to `"position"`)
* `"windowstate"` (not yet implemented)
- Legend now features a new property `"itemhitfcn"`, allowing the
execution of a callback function when a legend item is clicked.
### Matlab compatibility
- `inline` functions now support all Matlab methods. The performance
of `inline` functions has also been improved.
- `sub2ind` now supports index values outside of the size specified by
the subscripts.
- `cylinder` now accepts a scalar for the radius argument.
- `clock` now has an optional second output `ISDST` which indicates if
Daylight Savings Time is in effect for the system's time zone.
- `print` now accepts option `-image` to specify the "opengl" renderer
and `-vector` to specify the "painters" renderer.
- `format` now accepts the option "default", which is equivalent to
calling `format` without any options to reset the default state.
- `quadgk` now stops iterating when `error <= tolerance` while the previous
condition was `error < tolerance`.
- `mean` now accepts vector dimensions and options to handle `NaN` values.
The option `"a"` (arithmetic mean), `"g"` (geometric mean), and `"h"`
(harmonic mean) are no longer accepted, only the arithmetic mean is computed.
For the geometric and harmonic mean, please use respective functions
`geomean` and `harmmean` from the Octave Statistics package.
- `var` and `std` now optionally output a second argument containing the mean
or weighted mean.
- `integral` can now accept the 'ArrayValued' option in combination with
'RelTol' and 'WayPoints'.
- File system operations that remove files (e.g., `unlink` or `rmdir`) now also
remove files that have their read-only file attribute set on Windows.
- The default state for certain graphics properties has been made
consistent with Matlab.
Object | Property | Default State
------------|------------------|------------
figure | "dockcontrols" | "on"
- `ode45`, `ode23`, and `ode23s` have improved results for options `Events`,
`OutputFcn`, and `Refine`, along with corrected orientation of struct
outputs.
- *Early notice of future breaking changes*: Due to many user requests that
Octave should have a Matlab-compatible string class, there is work under way
to implement a string class that will differ from a vector of characters. In
Octave, single-quoted character arrays are currently compatible with Matlab,
but double-quoted forms are not. Currently in Octave, both 'foo' and "foo"
are largely interchangeable, barring certain escape sequence interpretations
such as "\n" (converted to a single newline character) as opposed to '\n'
(two separate characters). Matlab’s single-quoted character arrays and
double-quoted strings do not process backslash escape sequences, unlike many
other languages, and those escape sequences are instead processed by
individual functions such as `fprintf`.
Octave's behavior is likely to change in future as a consequence of
implementing Matlab-style string syntax. For example, 'foo' will remain a
three-element character vector, but "foo" will become a single-element string
object. Some backslash escape sequences are likely to differ from their
current Octave behavior, but will achieve greater Matlab compatibility. The
exact implementation is a work in progress, and may or may not include
methods of preserving backward compatibility.
*What this means for user code*: If your code currently relies on
double-quoted strings (e.g., "foo") representing character vectors as
opposed to string objects, and if you intend to update to a future version of
Octave incorporating the above changes, then consider replacing all
double-quoted strings with single-quoted strings in your code over time
(e.g., replace "foo" with 'foo'). Single-quoted strings are expected to
retain current behavior. Further, if your code relies on backslash escape
sequence interpretation in double-quoted strings (except for special cases
like the `printf` family), that code may need to change as well.
### Alphabetical list of new functions added in Octave 8
* `clearAllMemoizedCaches`
* `matlab.lang.MemoizedFunction`
* `memoize`
* `normalize`
* `pagectranspose`
* `pagetranspose`
* `uifigure`
### Deprecated functions, properties, and operators
The following functions and properties have been deprecated in Octave 8
and will be removed from Octave 10 (or whatever version is the second
major release after 8):
- Functions
Function | Replacement
-----------------------|------------------
shift | circshift
sparse_auto_mutate | none (see below)
- The `sparse_auto_mutate` function no longer has any effect on Octave's
behavior. Previously, after calling `sparse_auto_mutate (true)`,
Octave would automatically convert sparse matrices to full when a
sparse matrix required more memory than simply using full matrix
storage. This setting was `false` by default for compatibility with
Matlab. Now you must manually convert to full storage when desired.
- Properties
The following property names are discouraged, but there is no fixed
date for their removal.
Object | Property | Replacement
-----------------|-------------|------------
uimenu | label | text
uimenu | callback | menuselectedfcn
The following functions were deprecated in Octave 6 and have been removed
from Octave 8.
- Functions
Function | Replacement
-------------|------------
runtests | oruntests
- The environment variable used by `mkoctfile` for linker flags is now
`LDFLAGS` rather than `LFLAGS`. `LFLAGS` was deprecated in Octave 6,
and will be removed in a future version of Octave.
Summary of bugs fixed for version 8.1.0 (2023-01-22):
----------------------------------------------------
- Improved input validation and/or output handling for `poly`, `pinv`, `patch`,
`fill`, `fill3`, `qp`, `datevec`, `textscan`, `sub2ind`, `qr`, `airy`,
`regexp`, `dec2bin`, `dec2hex`, `mean`, and many others.
- Improved performance for `complex`, `fftw`, `delaunayn`, `isfield`, `tsearch`,
sparse matrix exponentiation, other sparse operations, and many others.
- Overhauled `@audiorecorder` and `@audioplayer` classes.
*: bump for libproxy 0.5
*: Recursive revbump from audio/libopus 1.4
revbump after textproc/icu update
Revbump due to dependecy change in qt5-qtbase Since these dependecies are bundled with qt5-qtbase and not exposed to qt5 using applications directly, only bump direct users of qt5-qtbase.
*: Recursive revbup from graphics/freetype2
*: recursive bump for tiff shlib major bump
massive revision bump after textproc/icu update
octave: updated to 7.3.0 GNU Octave 7.3.0 This version is a bug fixing release: Improvements and fixes scanf: Don’t set error when reaching end of stream Fix duplicate names displayed with mixed @class/classdef classes canonicalize_file_name: Handle symlinks to UNC network shares canonicalize_file_name: Generalize check for mapped network drive fortran_vec: Fix instances of method chaining that may cause dangling pointer. Fix wrong color in PDF printout of some LaTeX strings unpack.m: Escape backslashes in paths on Windows canonicalize_file_name: Check root of potential mapped network drive nextpow2.m: Fix for input between 0.5 and 1 quad2d: Fix unintended complex conjugate return Make sure we don’t pass short 8.3 path to latex on Windows canonicalize_file_name: Trim trailing file separators from root of mapped network drive imformats.m: Fix isa function in return value pie3: Fix “Too many input” args error. Accept negative inputs to -2^63 for dec2bin and dec2hex Fix incorrect lambda outputs for lsqnonneg and pqpnonneg addtodate.m: Fix wrong month returned when subtracting a month from some end-of-month dates var.m: Fix some Inf and NaN inputs returning 0 instead of NaN var.m: Fix automatic broadcasting error for sparse and diagonal matrix inputs with vector weighting legend.m: Fix error with contour plot containing clabels dec2bin.m: Fix input validation glpk.m: Avoid using isfinite on potentially sparse input. var.m: Use bsxfun rather than broadcasting with vector weighting Fix out of bound indexing in in-place broadcasting operations GUI Respect confirmation when deleting files in file browser widget Build system / Tests io.tst: Add test case for scanf nextpow2.m: Add bug number tag to regression tests quad2d.m: Add BIST to cset b0e90ca8e679 Add test for number of methods with classdef in @folder Use Autoconf macro to find egrep executable. Documentation uitable.m: Fix example code Clarify number of processors returned by nproc with hyperthreading. Minor wording change to hashing documentation. lsqnonneg and pqpnonneg: Document undocumented outputs. pqpnonneg.m: Improve docstring readability. lsode: Make TeX and non-TeX docstrings agree. curl: Fix error in TeX docstring. Update text on function argument checking. schur: Update documentation.
*: bump PKGREVISION for libunistring shlib major bump
octave: updated to 7.2.0
Summary of bugs fixed for version 7.2.0 (2022-07-28):
----------------------------------------------------
For
Improvements and fixes
- Avoid out-of-bounds indexing when checking for broadcastable inplace operators
- `hdl2struct.m`: Fix saving of `uibuttongroups`
- Fix `ls` with glob patterns on Windows
- `pkg.m`: Create directory before saving file
- `nchoosek.m`: Fix freeze-up for certain integer inputs
- `nchoosek.m`: Restore fast path code for floating point inputs
- `betainc.m`: Use sophisticated technique for calculating exponents to avoid inaccuracies
- `ls.m`: Fix handling of `\` on UNIX platforms
- `findobj.m`: Fix input validation of graphics handles
- `newplot.m`: Backed out changeset fdd58773ac02
- `__print_parse_opts__.m`: Initialize variables in all cases for print warnings
- `__wglob__`: Correctly handle `.` and `..` in patterns on Windows
- `datenum.m`: Correctly handle arrays with leading singleton dimensions
- Stop incorrect error when `reset()` called on `uimenu` handle
- Emit more informative error message on empty input when setting axis limits
- `msgbox.m`: Allow "custom" `cdata` for icon
- Fix memory leak with nested functions and anonymous functions
- `__wglob__`: Retain trailing file separator on Windows
- `pkg`: Avoid error when unlinking non-existent files
- `mkoctfile.m`: Trim whitespace (newline) around system output.
- `subplot.m`: Avoid error when mixing `rcn` and `"position"` calling form
- `plot`: Deprecate using numbers to select line colors
- Don't shut down interpreter immediately on `execute`
- `isprime.m` and `__isprimelarge__.cc`: Minor performance tweaks.
- `__wglob__`: Handle patterns with UNC paths on Windows
- Change wording of error message when using a variable as function
- `inputParser.m`: Adapt for interpreter changes regarding number of output arguments
- Store token ID, not keyword ID when parsing keywords
- `canonicalize_file_name`: Do not translate mapped network drive to UNC path
- `inputParser`: Correctly handle cell default values for optional parameters
- `factor.m`: Performance tweak to avoid division in certain cases.
- Fix regression with `\color[rgb]` TeX pattern
- `regexp`: Check pattern length before accessing it
- `pkg.m`: Create `PREFIX` and `ARCHPREFIX` directories
- `pkg`: Replace `OCTAVE_HOME` in `PREFIX` and `ARCHPREFIX` independently
- `randmtzig.cc`: Add missing `#include <ctime>`
- `pkg`: Fix formatting of `copyfile` message
- `pkg`: Escape special characters in `OCTAVE_HOME` for `regexprep`
GUI
- Fix removing trailing spaces on closing a modified file
- Replace use of deprecated `QDesktopWidget` in GUI.
- Fix display in Variable Editor when `fixed_point_format` is on
- Fix file length when saving shorter content in editor
Build system / Tests
- `addpref.m`: Recode test to work with multiple running instances of Octave.
- Don't leak build directories in installed directories
- Import `hash-buffer` modules from gnulib
- Remove `.dirstamp` files from `test/` directory with `maintainer-clean` target.
- Add tests for `__FILE__` and `__LINE__`
Documentation
- `datestr.m`: Fix minor typo.
- `ls.m`: Improve wording in docstring
- `dir.m`: Clarify wildcard behavior on Windows in docstring
- `memory.m`: Redo documentation to be formatted correctly in Info output.
- Document contracted `format` arguments
- `humps.m`: Fix mismatch between TeX docstring and non-TeX docstring.
- `warning_ids.m`: Add new warning ID `"Octave:deprecated-option"`.
- `primes.m`: Move code examples before math theory.
- `primes.m`: Mark variables in docstring with `@var{}` macro.
- Rewrite section on automatic type conversions
- `subsasgn`: Correct example code
*: bump PKGREVISION for flac shlib bump
Bump all dependent packages of wayland (belatedly) The package changed with the addition of its libepoll-shim dependency. Otherwise, we can get: ERROR: libepoll-shim>=0.0.20210418 is not installed; can't buildlink files.
*: Recursive revbump from audio/pulseaudio
*: recursive bump for perl 5.36
revbump for textproc/icu update
m*/*: revbump(1) for libsndfile
octave: updated to 6.4.0
Summary of bugs fixed for version 6.4.0 (2021-10-30)
----------------------------------------------------
Improvements and fixes
- Reduce memory usage in BISTs for `copyobj`, `hgsave`.
- `hgsave.m`, `copyobj.m`: Use `'qt'` graphics toolkit in BISTs.
- `main.cc`: Use `getopt` to parse command line arguments.
- `main.cc`: Remove invalid case.
- Disable `getopt` error reporting in wrapper program.
- `interp1.m`: Don't interpret later numeric input as `xi`.
- `pkg`: Improve similar package name suggestion.
- Store parent name in function object when caching parents in scope.
- Avoid internal error and segfault with `eval` and scripts.
- `rmpath`: Prevent removing the current directory from the load path.
GUI
- Fix missing interpreter event in `octave-scintilla`.
- Fix opening a file in a custom editor.
Documentation
- Improve docstring for `disable_diagonal_matrix`, `disable_diagonal_matrix`,
and `disable_range`.
- `cbrt`: Clarify that function errors for non-real input.
- `dsearchn.m`: Added optional distance output description.
- Add Hungarian translation for project description files.
- Document fsolve output "info" -2.
Build system
- Correct error message for incompatible CXSparse.
Summary of bugs fixed for version 6.3.0 (2021-07-11)
----------------------------------------------------
Important notice
- This bug fix release breaks ABI compatiblity with Octave 6.2.0. Re-build
binaries (like .oct or .mex files) when updating to this version.
Improvements and fixes
- `ls-hdf5.cc`: Avoid throwing inside HDF5 function.
- `ls-hdf5.cc`: Handle non-zero terminated type strings.
- Fix occasional segfault in `symbfact`.
- `fsolve.m`: Fix undefined output error when using `Output` function.
- Fix compilation error with `iconv_t` on Solaris.
- build: Check for `stropts.h`.
- Avoid ambiguous call to `pow`.
- Fix context link when creating handle to nested function.
- `print.m`: Warn when figure is too large to be printed to output page.
- Defer clearing function vars until stack frame is deleted.
- Avoid memory leaks when returning handles to nested functions.
- Hold references to closure frames in anon functions if needed.
- `eigs`: Prevent possible segmentation fault at exit.
- Issue warning when gnuplot graphics toolkit is initialized.
- mpoles.m: Fix detection of pole multiplicity.
- Perform shutdown actions in interpreter destructor.
- build: Make relocation of dependencies with Octave optional.
- `qz.cc`: Return correct number of eigenvalues.
- `qz.cc`: Let test pass with LAPACK 3.9.1 and earlier versions.
- `pkg.m`: Use default prefixes unless otherwise set previously.
- `betaincinv.m`: Correctly handle small inputs.
- `betaincinv.m`: Correctly handle inputs very close to 1.0.
- `unistd-wrappers.c`: Allocate sufficient memory for `new_argv`.
- Mark system functions correctly if `OCTAVE_HOME` is non-canonical.
- Mark compiled system functions correctly if `OCTAVE_HOME` is non-canonical.
- Fix error if test suite is run before Octave is installed.
- `lo-array-errwarn.cc`: Include `<limits>`.
- Use `std::size_t` and `std::ptrdiff_t` in C++ code.
- Use `std::size_t` in more instances.
- Return proper number of stack frames for `dbstack (N)` call.
- Avoid ambiguous match of overloaded function.
- `lscov.m`: Relax BIST tolerance to pass with OpenBLAS.
- `print`: Fix error when `"px"` word is present in a figure.
- `logm.m`: Fix check for real negative values in complex vector.
- build: Set necessary flags to allow execution on Windows Vista.
- Declare base_parser destructor virtual.
- `hist.m`: Improve handling and docstring for third parameter "norm".
- `logm.m`: Allow tolerance in check for real negative values in complex vector.
- `expm.m`, `logm.m`: Use function `isdiag` to detect if input is a diagonal matrix.
- tests: Relax tolerance for some tests on macOS.
- `logspace.m`: Mark tests as known to fail on macOS.
- `hist.m`: Use deterministic test.
- `rgb2ind.m`: Reduce memory usage and eliminate randomness in test.
- `logm.m`: Allow larger tolerance for test on macOS.
- build: Use correct path to `octave` binary in build tree on macOS.
- build: Fix typo in folder to libraries when building `.oct` or `.mex` files.
- build: Set DL_LDFLAGS in the build rules for .oct or .mex files.
- `rgb2ind.m`: Suppress output in test.
- Improve documentation for `log2` function.
- `ind2sub`: Fix typo in "see also" section of docstring.
- `mrdivide`, `mldivide`: Document that functions might return minimum norm solutions.
- Fix scoping issue for handles to sibling nested functions.
- `ls-mat5.cc`: Avoid integer overflow in calculation of buffer size for zlib.
- Move top-level REPL from interpreter to evaluator.
- Avoid crash with `dbquit` when executing command in terminal from GUI.
GUI
- Fix calling external editor.
- Fix missing file suffix .m when saving a new script.
- Do not run files that are not saved as Octave files.
- Fix confirm overwrite for native editor file "save as" dialogs.
- Fix crash when GUI tries to restore missing previous Octave dir.
- Fix restoring the horizontal position of docked GUI widgets.
- Prevent floating widgets from re-opening after restart.
- Avoid crash in GUI for `rmdir("")`.
- Fix EOL mode when saving files under new names.
- Fix auto indentation of switch-structure in GUI editor.
- Avoid crash when closing GUI with open editor tabs.
- `octave-qscintilla.cc` (`contextmenu_run`): Fix keyboard command handling.
Documentation
- Improve Differential Equations chapter and example for lsode.
- Clarify usage of "Depends" keyword in package `DESCRIPTION` file.
- Add note that wildcard patterns for `save` are glob patterns.
- Change example for Delaunay triangulation to match the generating code.
- Document single precision issues with OpenGL graphics toolkits.
- Minor changes to documentation of single precision issues with OpenGL.
- Expand on documentation for command syntax.
- `isprop.m`: Document that function only works on graphics objects in Octave 6.X.
- Explain how to write dual-purpose executable scripts and Octave functions.
- Update keyword docstrings.
- Use Texinfo commands to improve `transpose()` docstring rendering.
- `betainc.m`, `betaincinv.m`: Correct non-TeX definition of beta incomplete integral.
- Grammarcheck documentation ahead of 6.3 release.
- Spellcheck documentation ahead of 6.3 release.
revbump for icu and libffi
*: recursive bump for gstreamer 1.18.5
revbump for boost-libs
*: Recursive revbump from audio/pulseaudio-15.0
unbreak octave on NetBSD Change the way iconv_t void* conflict is handled using a patch from upstream to fix PR pkg/56240 . Due to the above remove patch-libinterp_corefcn_input.cc and patch-liboctave_wrappers_iconv-wrappers.h . Execute autoconf in the configuration step so that patch-configure.ac and patch-m4_acinclude.m4 is actually used. Change the PLIST so that -gnu is not used references in patch-m4_acinclude.m4 mentions this. Explicitly don't generate any docs since generation octave.pdf breaks and it already exists. Install info and man pages manually since they are not installed due to docs not being generated. Bump pkgrevision due to PLIST change.
octave: udpate to 6.2.0
This updates octave and also gets some more recommened dependencies in,
namely qrupdate and Mesalib (for osmesa) and gl2ps as well as the
qscintilla editor. The glpk option is on by default again.
This version of octave comes rather close to a standard build, with
optimzied BLAS and GUI fluff. We are still missing SuiteSparse and
SUNDIALS solvers, see
https://octave.org/doc/v6.2.0/External-Packages.html
PortAudio should also be considered, and LLVM be watched if that
experimental JIT settles in.
Upstream changes since 5.x:
Summary of important user-visible changes for version 6.1.0 (2020-11-26):
------------------------------------------------------------------------
### General improvements
- The `intersect`, `setdiff`, `setxor`, `union`, and `unique` functions
accept a new sorting option `"stable"` which will return output values
in the same order as the input, rather than in ascending order.
- Complex RESTful web services can now be accessed by the `webread` and
`webwrite` functions alongside with the `weboptions` structure. One
major feature is the support for cookies to enable RESTful
communication with the web service.
Additionally, the system web browser can be opened by the `web`
function.
- The `linspace` function now produces symmetrical sequences when the
endpoints are symmetric. This is more intuitive and also compatible
with recent changes made in Matlab R2019b.
- The underlying algorithm of the `rand` function has been changed.
For single precision outputs, the algorithm has been fixed so that it
produces values strictly in the range (0, 1). Previously, it could
occasionally generate the right endpoint value of 1 (See bug #41742).
In addition, the new implementation uses a uniform interval between
floating point values in the range (0, 1) rather than targeting a
uniform density (# of random integers / length along real number
line).
- Numerical integration has been improved. The `quadv` function has
been re-written so that it can compute integrands of periodic
functions. At the same time, performance is better with ~3.5X fewer
function evaluations required. A bug in `quadgk` that caused complex
path integrals specified with `"Waypoints"` to occasionally be
calculated in the opposite direction was fixed.
- The `edit` function option `"editinplace"` now defaults to `true` and
the option `"home"` now defaults to the empty matrix `[]`. Files will
no longer be copied to the user's HOME directory for editing. The old
behavior can be restored by setting `"editinplace"` to `false` and
`"home"` to `"~/octave"`.
- The `format` command supports two new options: `uppercase` and
`lowercase` (default). With the default, print a lowercase 'e' for
the exponent character in scientific notation and lowercase 'a-f' for
the hex digits representing 10-15. With `uppercase`, print 'E' and
'A-F' instead. The previous uppercase formats, `E` and `G`, no longer
control the case of the output.
Additionally, the `format` command can be called with multiple options
for controlling the format, spacing, and case in arbitrary order.
For example:
format long e uppercase loose
Note, in the case of multiple competing format options the rightmost
one is used, and, in case of an error, the previous format remains
unchanged.
- L-value references (e.g., increment (++), decrement (--), and all
in-place assignment operators (+=, -=, *=, /=, etc.)) are no longer
allowed in anonymous functions.
- New warnings have been added about questionable uses of the colon ':'
range operator. Each has a new warning ID so that it can be disabled
if desired.
> `Octave:colon-complex-argument` : when any arg is complex
> `Octave:colon-nonscalar-argument` : when any arg is non-scalar
- The `regexp` and related functions now correctly handle and *require*
strings in UTF-8 encoding. As with any other function that requires
strings to be encoded in Octave's native encoding, you can use
`native2unicode` to convert from your preferred locale. For example,
the copyright symbol in UTF-8 is `native2unicode (169, "latin1")`.
- The startup file `octaverc` can now be located in the platform
dependent location for user local configuration files (e.g.,
${XDG_CONFIG_HOME}/octave/octaverc on Unix-like operating systems or
%APPDATA%\octave\octaverc on Windows).
- `pkg describe` now lists dependencies and inverse dependencies
(i.e., other installed packages that depend on the package in
question).
- `pkg test` now tests all functions in a package.
- When unloading a package, `pkg` now checks if any remaining loaded
packages depend on the one to be removed. If this is the case `pkg`
aborts with an explanatory error message. This behavior can be
overridden with the `-nodeps` option.
- The command
dbstop in CLASS at METHOD
now works to set breakpoints in classdef constructors and methods.
#### Graphics backend
- The use of Qt4 for graphics and the GUI is deprecated in Octave
version 6 and no further bug fixes will be made. Qt4 support will be
removed completely in Octave version 7.
- The `legend` function has been entirely rewritten. This fixes a
number of historical bugs, and also implements new properties such as
`"AutoUpdate"` and `"NumColumns"`. The gnuplot toolkit---which is no
longer actively maintained---still uses the old legend function.
- The `axis` function was updated which resolved 10 bugs affecting
axes to which `"equal"` had been applied.
- Graphic primitives now accept a color property value of `"none"`
which is useful when a particular primitive needs to be hidden
(for example, the Y-axis of an axes object with `"ycolor" = "none"`)
without hiding the entire primitive `"visibility" = "off"`.
- A new property `"FontSmoothing"` has been added to text and axes
objects that controls whether anti-aliasing is used during the
rendering of characters. The default is `"on"` which produces smooth,
more visually appealing text.
- The figure property `"windowscrollwheelfcn"`is now implemented.
This makes it possible to provide a callback function to be executed
when users manipulate the mouse wheel on a given figure.
- The figure properties `"pointer"`, `"pointershapecdata"`, and
`"pointershapehotspot"` are now implemented. This makes it possible
to change the shape of the cursor (pointer in Matlab-speak) displayed
in a plot window.
- The figure property `"paperpositionmode"` now has the default `"auto"`
rather than `"manual"`. This change is more intuitive and is
Matlab compatible.
- The appearance of patterned lines `"LineStyle" = ":"|"--"|"-."` has
been improved for small widths (`"LineWidth"` less than 1.5 pixels)
which is a common scenario.
- Printing to EPS files now uses a tight bounding box (`"-tight"`
argument to print) by default. This makes more sense for EPS
files which are normally embedded within other documents, and is
Matlab compatible. If necessary use the `"-loose"` option to
reproduce figures as they appeared in previous versions of Octave.
- The following print devices are no longer officially supported: cdr,
corel, aifm, ill, cgm, hpgl, mf and dxf. A warning will be thrown
when using those devices, and the code for supporting those formats
will eventually be removed from a future version of Octave.
- The placement of text subscripts and superscripts has been
re-engineered and now produces visually attractive results similar to
Latex.
### Matlab compatibility
- The function `unique` now returns column index vectors for the second
and third outputs. When duplicate values are present, the default
index to return is now the `"first"` occurrence. The previous Octave
behavior, or Matlab behavior from releases prior to R2012b, can be
obtained by using the `"legacy"` flag.
- The function `setdiff` with the `"rows"` argument now returns Matlab
compatible results. The previous Octave behavior, or Matlab behavior
from releases prior to R2012b, can be obtained by using the `"legacy"`
flag.
- The functions `intersect`, `setxor`, and `union` now accept a
`"legacy"` flag which changes the index values (second and third
outputs) as well as the orientation of all outputs to match Matlab
releases prior to R2012b.
- The function `streamtube` is Matlab compatible and plots tubes along
streamlines which are scaled by the vector field divergence. The
Octave-only extension `ostreamtube` can be used to visualize the flow
expansion and contraction of the vector field due to the local
crossflow divergence.
- The interpreter now supports handles to nested functions.
- The graphics properties `"LineWidth"` and `"MarkerSize"` are now
measured in points, *not* pixels. Compared to previous versions
of Octave, some lines and markers will appear 4/3 larger.
- The meta.class property "SuperClassList" has been renamed
"Superclasslist" for Matlab compatibility. The original name will
exist as an alias until Octave version 8.1.
- Inline functions created by the function `inline` are now of type
"inline" when interrogated with the `class` function. In previous
versions of Octave, the class returned was "function_handle". This
change is Matlab compatible. Inline functions are deprecated in
both Matlab and Octave and support may eventually be removed.
Anonymous functions can be used to replace all instances of inline
functions.
- The function `javaaddpath` now prepends new directories to the
existing dynamic classpath by default. To append them instead, use
the new `"-end"` argument. Multiple directories may now be specified
in a cell array of strings.
- An undocumented function `gui_mainfcn` has been added, for compatibility
with figures created with Matlab's GUIDE.
- Several validator functions of type `mustBe*` have been added. See
the list of new functions below.
### Alphabetical list of new functions added in Octave 6
* `auto_repeat_debug_command`
* `commandhistory`
* `commandwindow`
* `filebrowser`
* `is_same_file`
* `lightangle`
* `mustBeFinite`
* `mustBeGreaterThan`
* `mustBeGreaterThanOrEqual`
* `mustBeInteger`
* `mustBeLessThan`
* `mustBeLessThanOrEqual`
* `mustBeMember`
* `mustBeNegative`
* `mustBeNonempty`
* `mustBeNonNan`
* `mustBeNonnegative`
* `mustBeNonpositive`
* `mustBeNonsparse`
* `mustBeNonzero`
* `mustBeNumeric`
* `mustBeNumericOrLogical`
* `mustBePositive`
* `mustBeReal`
* `namedargs2cell`
* `newline`
* `ode23s`
* `ostreamtube`
* `rescale`
* `rotx`
* `roty`
* `rotz`
* `stream2`
* `stream3`
* `streamline`
* `streamtube`
* `uisetfont`
* `verLessThan`
* `web`
* `weboptions`
* `webread`
* `webwrite`
* `workspace`
### Deprecated functions and properties
The following functions and properties have been deprecated in Octave 6
and will be removed from Octave 8 (or whatever version is the second
major release after 6):
- Functions
Function | Replacement
-----------------------|------------------
`runtests` | `oruntests`
- Properties
Object | Property | Value
-----------------|---------------|------------
| |
- The environment variable used by `mkoctfile` for linker flags is now
`LDFLAGS` rather than `LFLAGS`. `LFLAGS` is deprecated, and a warning
is emitted if it is used, but it will continue to work.
### Removed functions and properties
The following functions and properties were deprecated in Octave 4.4
and have been removed from Octave 6.
- Functions
Function | Replacement
---------------------|------------------
`chop` | `sprintf` for visual results
`desktop` | `isguirunning`
`tmpnam` | `tempname`
`toascii` | `double`
`java2mat` | `__java2mat__`
- Properties
Object | Property | Value
---------------------|---------------------------|-----------------------
`annotation` | `edgecolor ("rectangle")` |
`axes` | `drawmode` |
`figure` | `doublebuffer` |
| `mincolormap` |
| `wvisual` |
| `wvisualmode` |
| `xdisplay` |
| `xvisual` |
| `xvisualmode` |
`line` | `interpreter` |
`patch` | `interpreter` |
`surface` | `interpreter` |
`text` | `fontweight` | `"demi"` and `"light"`
`uibuttongroup` | `fontweight` | `"demi"` and `"light"`
`uicontrol` | `fontweight` | `"demi"` and `"light"`
`uipanel` | `fontweight` | `"demi"` and `"light"`
`uitable` | `fontweight` | `"demi"` and `"light"`
*: recursive bump for perl 5.34
math/fftw and dependents: merge math/fftwf backin and add MPI and OpenMP This yields one common package to provide libfftw3 (double) and libfftw3f (single) by default and optionally the Fortran bindings as well as OpenMP and MPI variants, and those with long double or quad precision. This changes all packages depending on fftwf in the same commit to minimize the time of inconsistency. Soon, math/fftwf will disappear.
revbump for boost-libs
revbump for textproc/icu
*: Recursive revbump from audio/pulseaudio-14.2.nb1
revbump for qhull
*: Recursive revbump from audio/pulseaudio-14.0
Revbump for openpam cppflags change months ago, belatedly.
*: Recursive revbump from textproc/icu-68.1
math/blas, math/lapack: Install interchangeable BLAS system Install the new interchangeable BLAS system created by Thomas Orgis, currently supporting Netlib BLAS/LAPACK, OpenBLAS, cblas, lapacke, and Apple's Accelerate.framework. This system allows the user to select any BLAS implementation without modifying packages or using package options, by setting PKGSRC_BLAS_TYPES in mk.conf. See mk/blas.buildlink3.mk for details. This commit should not alter behavior of existing packages as the system defaults to Netlib BLAS/LAPACK, which until now has been the only supported implementation. Details: Add new mk/blas.buildlink3.mk for inclusion in dependent packages Install compatible Netlib math/blas and math/lapack packages Update math/blas and math/lapack MAINTAINER approved by adam@ OpenBLAS, cblas, and lapacke will follow in separate commits Update direct dependents to use mk/blas.buildlink3.mk Perform recursive revbump
*: bump PKGREVISION for perl-5.32.
*: revbump for libsndfile
*: revbump after fontconfig bl3 changes (libuuid removal)
Revbump for icu
revbump after updating security/nettle
(math/octave) build fix: Remove configure.ac from SUBST_FILES.qt5-pkg-config
revbump after boost update
octave: updated to 5.2.0 Summary of bugs fixed for version 5.2.0: Improvements - Lock amd and symbfact to avoid segmentation fault with SuiteSparse - Fix segfault when calculating patch vertex normals - Fix segfault in constructing patch normals for lighting - mat2str.m: Fix for logical matrix (add `transpose`). - improve file equality check for MS Windows - ismember.m: Fix second return argument when values are complex - findobj.m: Fix typo and correctly handle numeric properties - Correctly display integer types with format hex - Cast `winqueryreg` `REG_DWORD` types to `DWORD` - Fix numerous errors in `audiowrite` / `audioread` - print.m: Pass quoted path to `octave-svgconvert` - dir.m: Fix occasionally returning incorrect folder field - Stop segfault when calling 3-input form of `diag` with cell arrays - improve message for setting breakpoint in nonexistent function - Use framebuffer object for printing invisible Qt figures on mac - Escape backslash characters in `EPS` output - Use replacement characters to display non UTF-8 strings in figures - inputrc: Add warning about modification - documentation.cc (global_search): just return if query string is empty - Default (c)transpose for old style class arrays - Always reserve at least 1 element of storage for sparse matrices - Don't segfault at exit after reading malformed HDF5 file - Fix pause() with no arguments called on Windows - refactor minimum eigenvalue index search in `qp` - qp: fix obscure corner case when calculating `qp` caused by a typo - use `std::streampos` instead of `std::ios::streampos`. - fix `pause` and `kbhit` with glibc 2.28 end-of-file state behavior - Fix return of left-handed vectors when inputs are complex - waitbar.m: Fix hang when using `createcancelbtn` property - shading.m: Fix unexpected error when multiple `hggroups` present - dec2base.m: Correctly handle zero matrix input - eliminate duplicate graphics callback object stack - Improve performance when closing figures - Reduce time to process `pkg -forge list` by 30X - Feed `fig2dev` with PDF files converted from svg - Improve error checking for `iconv_open`. - poly.m: fix the fix for input of complex conjugate pairs - mkoctfile: use the `TMPDIR` environment variable if set - line.m: Fix creation of unwanted axes - Accept 4-input form for quiver3 - pkg.m: restore installing packages from zip archives - axis.m: Fix issues with `equal` argument - ordeig.m: Do not fail on 1x1 matrices GUI - fix editors search and replace in selection - undo a complete replace all action in the editor - fix missing unlock of mutex when gui editor is not present - prevent unnamed editor tab from being closed by `rmdir` - prevent editor from closing files that are not affected by `rmdir` - fix creating keyword files for editor autocompletion - fix dock widget position when being dragged out of the main window Build system / Tests - configure: prevent overlinking when SUNDIALS is disabled - use QtCore and Qt5Gui modules instead of Qt5OpenGL - make building with Qt4 QGLWidget work again - build: adapt mk-qthelp.pl to changes in Texinfo 6.7. - BIST should not rely on the current directory to be writable. - bp-table.cc: Fix test. - maint: Make old style class tests Matlab compatible. - Add BIST tests for `unlink` Documentation - fix many spelling errors - help: improve documentation for the `startup.m` user script. - avoid conflict with @seealso macro in Texinfo 6.6 - mk-doc-cache.pk: Also translate `@seealso` here. - __makeinfo__.m: Also translate `@seealso` here - polar.m: Document that input is expected to be in radians - gallery.m: Fix typo in docstring for poisson - Add 1024x1024 Octave logo icon - add `.editorconfig` for default file encoding and indentation. - octave.doap: Copy localized (short) description over from appdata - org.octave.Octave.appdata.xml: Add German and French description - languages/*.ts: updated language files - quiver3.m: Fix texinfo typo in docstring from cset f7b10bd40045. - doc: fix `.` Operator Index entry to build with Texinfo 6.7. - doc: improve example of using global variables from oct-files. - doc: Create en-dashes and em-dashes correctly in documentation. - doc: expand `page_output_immediately` doc string, mention `page_screen_output`. - doc: Clarify documentation of `history_file` - doc: Improve documentation for `get_help_text`, `get_help_text_from_file`. - doc: Add documentation for `GNUTERM` variable used with gnuplot - doc: Improve `contour` docstring example - doc: Add example to show limitations of the given BLAS integer size. - doc: Improve documentation of sparse functions. - doc: Improve spelling of `bicgstab` - doc: Remove `Map` functions `keys`, `values`, `remove` from unimplemented list - doc: Add function index entry for alias `inverse` - add content rating declaration to AppStream metadata - doc: Remove stray semicolons from `pie`, `pie3` calling forms. - doc: Redo documentation for `rats` function. - doc: Specify `position` property for text objects is a three-element vector - doc: state that Octave can only load HDF5 files created by itself - doc: Fix names of options in `issorted` - doc: Small fixes to `mat2cell` and `polyeig` docstrings - doc: Improve example code for using `-pdflatexstandalone` - doc: Refer to "root object" rather than "root figure object". - doc: Place cross-reference from list of graphics object properties back to object - doc: document the newline character in warning messages - doc: pkg versions can be more general than "x.y.z"
librsvg: update bl3.mk to remove libcroco in rust case recursive bump for the dependency change
*: recursive bump for libffi
have octave use arpack-ng 3.7.0 instead of arpack. This reduces test failures from 59 to 6 - PASS 15064 - FAIL 59 + PASS 15117 + FAIL 6 REGRESSION 1 XFAIL (reported bug) 26 SKIP (missing feature) 424
*: Recursive revision bump for openssl 1.1.1.
*: Recursive revbump from devel/boost-libs
math/octave: remove unrecognized configure args on Darwin, set --enable-link-all-dependencies
math: align variable assignments pkglint -Wall -F --only aligned -r Manual correction in R/Makefile.extension for the MASTER_SITES continuation line.
Recursive revbump from audio/pulseaudio
Recursive revbump from boost-1.71.0
Bump PKGREVISIONs for perl 5.30.0
*: recursive bump for gdk-pixbuf2-2.38.1
*: recursive bump for nettle 3.5.1
Recursive revbump from boost-1.70.0
all: replace SUBST_SED with the simpler SUBST_VARS pkglint -Wall -r --only "substitution command" -F With manual review and indentation fixes since pkglint doesn't get that part correct in every case.
Recursive revbump from textproc/icu
Recursive bump for ghostscript default change
Update to 5.1.0
Changelog:
# General improvements
The Octave plotting system now supports high resolution screens, i.e., those with greater than 96 DPI which are referred to as HiDPI/Retina monitors.
Unicode character support for files and folders in Windows.
A new core function movfun will apply a function to a sliding window of arbitrary size on a dataset and accumulate the results. Many common cases have been implemented using the naming scheme movXXX where XXX is the function that will be applied. For example, the moving average over a dataset is movmean. New moving window functions:
movfun movslice movmad movmax movmean movmedian movmin movprod movstd movsum movvar
The fsolve function has been tweaked to use larger step sizes when calculating the Jacobian of a function with finite differences. This leads to faster convergence.
The ranks function has been recoded for performance and is now 25X faster. In addition, it now supports a third argument that specifies how to resolve the ranking of tie values.
The function randi has been recoded to produce an unbiased (all results are equally likely) sample of integers. This may produce different results in existing code. If it is necessary to reproduce the exact random integer sequence as in previous versions use
ri = imin + floor ((imax - imin + 1) * rand ());
The function isdefinite now returns true or false rather than -1, 0, or 1. To test for a positive semi-definite matrix (old output of 0) check whether the following two conditions hold:
isdefinite (A) => 0 and isdefinite (A + 5*TOL, TOL) => 1
The intmax, intmin, and flintmax functions now accept a variable as input. Existing code to query the range of an existing variable can be simplified by removing the call to class that was previously required. For example defining the variable x = int8 (3) in the workspace, calls like
range = [ intmin(class(x)), intmax(class(x)) ]
can in Octave 5 be simplified to range = [ intmin(x), intmax(x) ].
The path handling functions no longer perform variable or brace expansion on path elements and Octave’s load-path is no longer subject to these expansions.
A new printing device is available, "-ddumb", which produces ASCII art for plots. This device is only available with the gnuplot toolkit.
# Dependencies
The GUI requires Qt libraries. The minimum Qt4 version supported is Qt4.8. Qt5 of any version is preferred.
The OSMesa library is no longer used. To print invisible figures when using OpenGL graphics, the Qt QOFFSCREENSURFACE feature must be available and you must use the qt graphics toolkit.
The FFTW library is now required to perform FFT calculations. The FFTPACK sources have been removed from Octave.
Matlab compatibility
* Many improvements.
octave: fix building with recent Qt5 Do not look for qcollectiongenerator, it has been incorporared into qhelpgenerator.
revbump for boost 1.69.0
revbump after updating textproc/icu
Revbump after cairo 1.16.0 update.
Recursive revbump from hardbuzz-2.1.1
Recursive bump for perl5-5.28.0
math/octave: Fix CHECK_WRKREF_SKIP patterns
revbump after boost-libs update
octave: PRINT_PLIST_AWK to avoid a recurrence of a broken PLIST. From wiz, thanks.
octave: don't make netbsd references in PLIST, accidentally went in with the update. skip checking for workdir references for liboctinterp which doesn't seem to actually make references (maybe it's debug info?)
Octave: update to 4.4.1
Remove hack that had a high chance of resulting in a dysfunctional package
qttools can't be a build dependency because we link against something
in it.
XXX pkgsrc claims this package has work directory references
Summary of important user-visible changes for version 4.4 (2018-04-30):
----------------------------------------------------------------------
** A graphical Variable Editor has been added to the GUI interface.
It uses a spreadsheet-like interface for quick, intuitive editing
of variables. The Variable Editor is launched by double-clicking
on a variable name in the Workspace Window or by typing
"openvar VARIABLE_NAME" in the Command Window.
** On systems with 64-bit pointers, --enable-64 is now the default and
Octave always uses 64-bit indexing. However, if the configure
script determines that the BLAS library uses 32-bit integers, then
operations using the following libraries are limited to arrays with
dimensions that are smaller than 2^31 elements:
BLAS LAPACK QRUPDATE SuiteSparse ARPACK
Additionally, the following libraries use "int" internally, so
maximum problem sizes are always limited:
glpk Qhull
** The octave command no longer starts the GUI by default. Most users
starting Octave from a shell were expecting the command line
interface, and desktop launchers already required the `--force-gui'
option. With this change, desktop launchers should be modified to
use the new option `--gui'. The previous `--force-gui' option will
continue to work, and maps to `--gui', but it will be removed in
Octave 6.
** A known bug in Qt (https://bugreports.qt.io/browse/QTBUG-55357) is
addressed by limiting GUI sub-panel relocation capabilities for Qt
versions in the range >= 5.6.1 and < 5.7.1. However, this may not
thoroughly avoid issues on all platforms.
** A new container data type--containers.Map--is available. Map is a
key/value storage container (a.k.a, a hash) that efficiently allows
storing and retrieving values by name, rather than by position which
is how arrays work.
** The bareword "import" is now recognized in scripts and functions.
However, the functionality to import functions and classes from
other namespaces into the local scope has not yet been implemented.
Attempting to use "import" will provoke an error message.
** hex2num and num2hex now work for integer and char types and num2hex
may optionally return a cell array of strings instead of a character
array. If given a cell array of strings, hex2num now returns a
numeric array of the same size as the input cell array. Previously,
hex2num would accept a cell array of strings of arbitrary dimension
but would always return a column vector.
** New special functions cosint, sinint, and gammaincinv have been added.
** Special functions in Octave have been rewritten for larger input
domains, better accuracy, and additional options.
* gammainc now accepts negative real values for X.
* improved accuracy for gammainc, betainc, betaincinv, expint.
* gammainc has new options "scaledlower" and "scaledupper".
* betainc, betaincinv have new option "upper".
** The "names" option used in regular expressions now returns a struct
array, rather than a struct with a cell array for each field. This
change was made for Matlab compatibility.
** The quadcc function now uses both absolute tolerance and relative
tolerance to determine the stopping criteria for an integration.
To be compatible with other quadXXX functions, such as quadgk, the
calling syntax has changed to
quadcc (f, a, b, [AbsTol, [RelTol]])
To update existing code, change instances of RelTol to [0, RelTol].
quadcc (f, a, b, tol) => quadcc (f, a, b, [0, tol])
A warning that a single tolerance input is now interpreted as an
absolute tolerance will be issued in Octave versions 4.4 and 5,
after which it will be removed. The warning has ID
"Octave:quadcc:RelTol-conversion" and can be disabled with
warning ("off", "Octave:quadcc:RelTol-conversion")
** The qr function now returns a standard factorization unless
explicitly instructed to perform an economy factorization by using a
final argument of 0.
** The Qt graphics toolkit now supports offscreen printing without osmesa
if Octave was built with Qt >= 5.1.
** The built-in pager for display of large data is now disabled by
default. To re-enable it for every Octave session add the following
to your .octaverc file:
more on;
** The FLTK toolkit is no longer prioritized for development. The
number of Octave Maintainers is too small to support three different
graphic toolkits. New development will target the Qt toolkit.
While no longer prioritized, the FLTK toolkit is not deprecated and
there is no schedule for its removal.
** The graphic object property "PickableParts" has been implemented
which controls whether an object can accept mouse clicks.
** The graphic object property "Interruptible" has been fully
implemented which controls whether a running callback function can
be interrupted by another callback function.
** The graphic object property "HitTest" has been updated to be fully
compatible with Matlab.
** Text objects now implement the properties "BackgroundColor",
"EdgeColor", "LineStyle", "LineWidth", and "Margin".
** An initial implementation of alpha transparency has been made for
patch and surface objects. Printing to svg and pdf is supported.
** ishandle now returns true for both graphics handle objects and
Java objects. The latter change was made for Matlab compatibility.
Use ishghandle or isgraphics if it is important not to include Java
objects.
** The pkg command now accepts a URL as an argument, allowing a valid
Octave package to be installed from any remote host with one command,
for example
pkg install https://example.org/download/example-package.tar.gz
** The following statistical functions have been moved from core
Octave to the statistics package available from Octave Forge.
BASE
cloglog
logit
prctile
probit
qqplot
table (renamed to crosstab)
DISTRIBUTIONS
betacdf
betainv
betapdf
betarnd
binocdf
binoinv
binopdf
binornd
cauchy_cdf
cauchy_inv
cauchy_pdf
cauchy_rnd
chi2cdf
chi2inv
chi2pdf
chi2rnd
expcdf
expinv
exppdf
exprnd
fcdf
finv
fpdf
frnd
gamcdf
gaminv
gampdf
gamrnd
geocdf
geoinv
geopdf
geornd
hygecdf
hygeinv
hygepdf
hygernd
kolmogorov_smirnov_cdf
laplace_cdf
laplace_inv
laplace_pdf
laplace_rnd
logistic_cdf
logistic_inv
logistic_pdf
logistic_rnd
logncdf
logninv
lognpdf
lognrnd
nbincdf
nbininv
nbinpdf
nbinrnd
normcdf
norminv
normpdf
normrnd
poisscdf
poissinv
poisspdf
poissrnd
stdnormal_cdf
stdnormal_inv
stdnormal_pdf
stdnormal_rnd
tcdf
tinv
tpdf
trnd
unidcdf
unidinv
unidpdf
unidrnd
unifcdf
unifinv
unifpdf
unifrnd
wblcdf
wblinv
wblpdf
wblrnd
wienrnd
MODELS
logistic_regression
TESTS
anova
bartlett_test
chisquare_test_homogeneity
chisquare_test_independence
cor_test
f_test_regression
hotelling_test
hotelling_test_2
kolmogorov_smirnov_test
kolmogorov_smirnov_test_2
kruskal_wallis_test
manova
mcnemar_test
prop_test_2
run_test
sign_test
t_test
t_test_2
t_test_regression
u_test
var_test
welch_test
wilcoxon_test
z_test
z_test_2
** The following image functions have been moved from core Octave to
the image package available from Octave Forge.
ntsc2rgb
rgb2ntsc
** Other new functions added in 4.4:
bounds
camlookat
camorbit
campos
camroll
camtarget
camup
camva
camzoom
corrcoef
cosint
decic
erase
gammaincinv
getframe
groot
gsvd
hgtransform
humps
integral
integral2
integral3
isgraphics
isstring
mad
ode15i
ode15s
openvar
quad2d
repelem
rgb2gray
rticks
sinint
tfqmr
thetaticks
vecnorm
winqueryreg
xticklabels
xticks
yticklabels
yticks
zticklabels
zticks
** Deprecated functions.
The following functions have been deprecated in Octave 4.4 and will
be removed from Octave 6 (or whatever version is the second major
release after 4.4):
Function | Replacement
---------------------|------------------
chop | sprintf for visual results
desktop | isguirunning
tmpnam | tempname
toascii | double
java2mat | __java2mat__
** The following functions were deprecated in Octave 4.0 and have been
removed from Octave 4.4.
allow_noninteger_range_as_index
bicubic
delaunay3
do_braindead_shortcircuit_evaluation
dump_prefs
find_dir_in_path
finite
fmod
fnmatch
gmap40
loadaudio
luinc
mouse_wheel_zoom
nfields
octave_tmp_file_name
playaudio
saveaudio
setaudio
syl
usage
** The "Octave:undefined-return-values" warning ID is obsolete. Octave
now throws an error for any attempts to assign undefined values that
might be returned from functions.
** Deprecated graphics properties.
The following properties or allowed corresponding values have been
deprecated in Octave 4.4 and will be removed from Octave 6 (or whatever
version is the second major release after 4.4):
Object | Property | Value
---------------------|-------------------------|-------------------
figure | doublebuffer |
| mincolormap |
| wvisual |
| wvisualmode |
| xdisplay |
| xvisual |
| xvisualmode |
axes | drawmode |
annotation | edgecolor ("rectangle") |
text | fontweight | "demi" and "light"
uicontrol | fontweight | "demi" and "light"
uipanel | fontweight | "demi" and "light"
uibuttongroup | fontweight | "demi" and "light"
** The rectangle and ellipse annotation property "edgecolor" has been
deprecated and will be removed from Octave 6 (or whatever version
is the second major release after 4.4). Use the property "color"
instead.
** The header file oct-alloc.h has been removed along with the macros
that it defined (DECLARE_OCTAVE_ALLOCATOR, DEFINE_OCTAVE_ALLOCATOR,
and DEFINE_OCTAVE_ALLOCATOR2).
Recursive revbump from textproc/icu-62.1
Revert hard-coded PKGSRC_FORTRAN setting. g95 is perfectly fine here.
octave: force gfortran, g95 is broken is most setups. build fix for newer qt. bump PKGREVISION.
Recursive revbump from audio/pulseaudio
revbump for boost-libs update
Add p11-kit to gnutls/bl3.mk and bump dependencies.
Recursive bump for new fribidi dependency in pango.
revbump after icu update
Recursive bumps for fontconfig and libzip dependency changes.
Bump PKGREVISION for gdbm shlib major bump
Revbump after boost update
Revbump after textproc/icu update
recursive bump for libxkbcommon removal from at-spi2-core
revbump for requiring ICU 59.x
recursive bump for qt5-qtwebkit dependency change
Recursive revbump from audio/pulseaudio-11.0
Revbump for boost update
Remove low GCC_REQD. Good luck making it past qt5 with GCC 3.0!
Forgot bsdtar as a dependency.
Make octave-forge work (on netbsd, with gfortran) allow overriding MKOCTFILE_* and use it to provide a full path gfortran, so the invocation doesn't fail because gfortran isn't normally in PATH Force the use of bsdtar. unpacking yielding random PaxHeaders.1234 triggers an octave package sanity check making the build of the 'signal' package fail with a cryptic error with no further diagnostics. bump PKGREVISION
hack: force disable a configure test. Fixes build with PKGSRC_FORTRAN=gfortran (6.4) on netbsd. resulting binary works fine. I suspect the issue is that the wrong gcc (one without fortran support) is invoked.
Pullup ticket #5504 - requested by maya
math/octave: build fix
Revisions pulled up:
- math/octave/Makefile 1.152
- math/octave/PLIST 1.30
---
Module Name: pkgsrc
Committed By: maya
Date: Mon Jul 3 13:40:00 UTC 2017
Modified Files:
pkgsrc/math/octave: Makefile PLIST
Log Message:
Get rid of charset.alias. it creates conflicts with other packages (gdb
being one example), and the logic for building it is conditional, causing
PLIST mismatches for GLIBC users.
Reported by Jason Bacon in pkgsrc-users.
Bump PKGREVISION
Get rid of charset.alias. it creates conflicts with other packages (gdb being one example), and the logic for building it is conditional, causing PLIST mismatches for GLIBC users. Reported by Jason Bacon in pkgsrc-users. Bump PKGREVISION
Recursive revbump from boost update
Revbump after icu update
Recursive revbump from graphics/libwebp
Recursive revbump from fonts/harfbuzz
Correct the default value of BUILDLINK_DEPMETHOD.arpack Since arpack installs a dynamic library, its BUILDLINK_DEPMETHOD shouldn't be set to "build" by default. Bump PKGREVISION of octave for its runtime dependency change.
Recursive bump for harfbuzz's new graphite2 dependency.
Recursive revbump from audio/pulseaudio-10.0
Revbump after boost update
Recursive revbump from textproc/icu 58.1
Octave: update to 4.2.0
pkgsrc changes: removed all patches to do with qt5 support, upstream
code does it now. blindly moved some patches that were replacing
INSTALL_PROGRAM to INSTALL_LIB as the build changed. added patch
replacing struct tm_zone with timezone_t to accommodate for missing
type in NetBSD - same as libgnu does.
ok adam
Summary of important user-visible changes for version 4.2:
---------------------------------------------------------
** The parser has been extended to accept, but ignore, underscore
characters in numbers. This facilitates writing more legible code
by using '_' as a thousands separator or to group nibbles into bytes
in hex constants.
Examples: 1_000_000 == 1e6 or 0xDE_AD_BE_EF
** The parser has been extended to understand binary numbers which
begin with the prefix '0b' or '0B'. The value returned is Octave's
default numeric class of double, not at unsigned integer class.
Therefore numbers greater than flintmax, i.e., 2^53, will lose some
precision.
Examples: 0b101 == 5 or 0B1100_0001 == 0xC1
** gnuplot 4.4 is now the minimum version supported by Octave.
** The default set of colors used to plot lines has been updated to be
compatible with Matlab's new default color scheme. The line plot
color scheme can be set with the axes property "ColorOrder".
** The default colormap is now set to "viridis" which is also the
default colormap in matplotlib. This new colormap fixes some of the
main issues with the old default colormap "jet" such as its bad
"luminance profile" and is also more similar to Matlab's new default
colormap "parula".
** The colormap function no longer supports the input argument "list"
to show built-in colormaps. Use "help colormap" to find the
built-in colormaps.
** The graphics command "hold on" now ensures that each new plot added
to an existing plot has a different color or linestyle according to
the "ColorOrder" and/or "LineStyleOrder" properties. This is
equivalent to the old command "hold all" and was made for Matlab
compatibility. Existing code *may* produce differently colored
plots if it did not specify the color for a plot and relied on each
new plot having the default first color in the "ColorOrder"
property.
** When starting, Octave now looks in the function path for a file
startup.m and executes any commands found there. This change was
made to accommodate Matlab users. Octave has it's own configuration
system based on the file .octaverc which is preferred.
** Octal ('\NNN') and hex ('\xNN') escape sequences in single quoted
strings are now interpreted by the function do_string_escapes().
The *printf family of functions now supports octal and hex escape
sequences in single-quoted strings for Matlab compatibility.
** Special octal and hex escape sequences for the pattern and
replacement strings in regular expressions are now interpreted for
Matlab compatibility.
octal: '\oNNN' or '\o{NNN}'
hex : '\xNN' or '\x{NN}'
** Unknown escape sequences in the replacement string for regexprep are
now substituted with their unescaped version and no warning is
emitted. This change was made for Matlab compatibility.
Example: regexprep ('a', 'a', 'x\yz')
=> 'xyz'
** mkfifo now interprets the MODE argument as an octal, not decimal,
integer. This is consistent with the equivalent shell command.
** linspace now returns an empty matrix if the number of requested
points is 0 or a negative number. This change was made to be
compatible with Matlab releases newer than 2011. In addition,
Octave no longer supports matrix inputs for A or B.
** The cov function now returns the complex conjugate of the result
from previous versions of Octave. This change was made for
compatibility with Matlab.
** condest now works with a normest1 compatible syntax.
** The griddata function no longer plots the interpolated mesh if no
output argument is requested, instead the vector or array of
interpolated values is always returned for Matlab compatibility.
** The new function "light" and the corresponding graphics object
provide light and shadow effects for patch and surface objects.
** The surfnorm function now returns unnormalized (magnitude != 1)
normal vectors for compatibility with Matlab.
** The normal vectors returned from isonormals have been reversed to
point towards smaller values for compatibility with Matlab.
** The quadl function now uses an absolute, rather than relative,
tolerance for Matlab compatibility. The default tolerance is 1e-6
which may result in lower precision results than previous versions
of Octave which used eps as the relative tolerance. The quadl
function has also been extended to return a second output with the
total number of function evaluations.
** The textscan function is now built-in and is much faster and much
more Matlab-compatible than the previous m-file version.
** Dialog boxes--errordlg, helpdlg, inputdlg, listdlg, msgbox,
questdlg, and warndlg--now exclusively use Qt for rendering.
Java based versions have been removed.
** The axes properties "TitleFontSizeMultiplier" and "TitleFontWeight"
are now implemented which control the default appearance of text
created with title().
The axes property "LabelFontSizeMultiplier" is now implemented
which controls the default appearance of text created with
xlabel(), ylabel(), or zlabel().
** The graphics property "box" for axes now defaults to "off".
To obtain equivalent plots to previous versions of Octave use
set (0, "DefaultAxesBox", "on");
in your .octaverc file.
** The graphics property "boxstyle" has been implemented. The default
is "back" which draws only the back planes in a 3-D view. If the
option is "full" then all planes are drawn.
** The graphics property "erasemode" has been hidden, and will
eventually be removed. This property has also been removed
from Matlab, and was never implemented in Octave.
** The graphics property "graphicssmoothing" for figures now controls
whether anti-aliasing will be used for lines. The default is "on".
** The value "zero" for the axes properties "xaxislocation" and
"yaxislocation" has been deprecated and will be removed from
Octave 4.6. Use "origin" instead.
** The publish function allows easy publication of Octave script files
in HTML or other formats, including figures and output created by
this script. It comes with its counterpart grabcode, which lets one
literally grab the HTML published code from a remote website, for
example.
** The value of the MEX variable TrapFlag now defaults to 0, which will
cause Octave to abort execution of a MEX file and return to the
prompt if an error is encountered in mexCallMATLAB.
** The MEX API now includes the function mexCallMATLABWithTrap. This
function will not abort if an error occurs during mexCallMATLAB, but
instead will return execution to the MEX function for error
handling.
** The MEX API functions for input validation that begin with "mxIs"
(e.g., mxIsDouble, mxIsEmpty, etc.) now return type bool rather than
type int.
** The functions mxAssert and mxAssertS for checking assertions have
been added. In order to avoid a performance penalty they are only
compiled in to debug versions of a MEX file, i.e., that are produced
when the '-g' option is given to mex or mkoctfile.
** Other new MEX API functions include mexEvalStringWithTrap,
mxIsScalar, mxCreateUninitNumericArray, mxCreateUninitNumericMatrix.
** Other new functions added in 4.2:
audioformats
camlight
condeig
deg2rad
dialog
evalc
hash
im2double
isocaps
lighting
localfunctions
material
normest1
ode23
ode45
odeget
odeplot
odeset
padecoef
profexport
psi
rad2deg
reducepatch
reducevolume
smooth3
uibuttongroup
** Deprecated functions.
The following functions have been deprecated in Octave 4.2 and will
be removed from Octave 4.6 (or whatever version is the second major
release after 4.2):
Function | Replacement
---------------------|------------------
bitmax | flintmax
mahalanobis | mahal in Octave-Forge statistics pkg
md5sum | hash
octve_config_info | __octave_config_info__
onenormest | normest1
sleep | pause
usleep | pause
wavread | audioread
wavwrite | audiowrite
** The following functions were deprecated in Octave 3.8 and have been
removed from Octave 4.2.
default_save_options java_new
gen_doc_cache java_unsigned_conversion
interp1q javafields
isequalwithequalnans javamethods
java_convert_matrix re_read_readline_init_file
java_debug read_readline_init_file
java_invoke saving_history
** The global error_state variable in Octave's C++ API has been
deprecated and will be removed in a future version. Now the error
and print_usage functions throw an exception
(octave::execution_exception) after displaying the error message.
This makes the error and print_usage functions in C++ work more like
the corresponding functions in the scripting language.
** The default error handlers in liboctave have been updated to use
exceptions. After displaying an error message they no longer return
control to the calling program. The error handler function can be
customized through the global variables
"current_liboctave_error_handler" and
"current_liboctave_error_with_id_handler". If a programmer has
installed their own custom error handling routines when directly
linking with liboctave then these must be updated to throw an
exception and not return to the calling program.
** The system for common errors and warnings has been renamed from
gripe_XXX to either err_XXX if error is called or warn_XXX if
warning is called. The gripe_XXX functions are deprecated and will
be removed in version 4.6.
** New configure option, --enable-address-sanitizer-flags, to build
Octave with memory allocator checks (similar to those in valgrind)
built in.
Revbump post boost update
Don't install lib/charset.alias
Update octave to 4.0.3 XXX installs lib/charset.alias - is this a problem? Bugs Fixed in GNU Octave 4.0.3 * doc: clarify differences between atan and atan2 (bug #48178) * doc: delete mention of unsupported syntax for looping over structs (bug #48064) * ver.m: return empty struct for unknown package (bug #48235). * Update gnulib subrepo for texinfo formatting fixes (bug #48001) * Fix typos in Java conversion of 32 and 64 bit integers (bug #48107) * Create valid gnuplot commands even for single-entry colormaps (bug #48083). * orderfields.m: Remove trailing bracket in docstring (bug #48063). * Don't overly restrict options passed to Java jvm (bug #39063). * Write integers with correct byte order on big-endian systems (bug #47434) * doc: Document syntax for specifying color when using Tex interpreter (bug #47907). * Round quantized pixel values before writing uintN images (bug #47746) * Fix popen2 error on Windows when child writes to stderr (bug #43036) * it_IT.ts: Correct Italian translation of "col:" (bug #47857). * avoid crash in audiowrite argument processing (bug #47875) * make __magick_read__ a built-in function (bug #41699) * sortrows.m: Improve docstring (bug #47844). * doc: Fix typo in exec docstring. * Use correct URL for Online Documentation (bug #47835). * Fix autoscale affecting legend axes objects (bug #47765). * configure.ac: Remove AC_CHECK_FUNC for pipe now that gnulib::pipe used. * doc: fix on manual the syntax to empty elements from cell array. * octave.texi: Set document encoding to UTF-8. * Enable the pipe function on Windows (bug #47614) * avoid mulitple definitions of static function-scope vars (bug #47372) * Array-sym.cc: Delete obsolete file. * Initialize variable to stop unstable results for lgamma (bug #47524). * call openmp function at initialization (bug #47372) * macros.texi: Colorized links for PDF files with Texinfo 6.x.
Recursive revbump from audio/pulseaudio
Bump PKGREVISION for perl-5.24.0 for everything mentioning perl.
Recursive revbump from textproc/icu 57.1
Fix build against Qt5 when reduced-relocation hack is active.
Bump PKGREVISION for security/openssl ABI bump.
Use OPSYSVARS.
update to octave-4.0.0 Octave 4.0 is a major new release with many new features, including a graphical user interface, support for classdef object-oriented programming, better compatibility with Matlab, and many new and improved functions. A list of important user-visible changes is availble at http://octave.org/NEWS-4.0.html, by selecting the Release Notes item in the News menu of the GUI, or by typing news at the Octave command prompt.
octave revbump bacuse of qhull update.
Bump all packages that depend on curses.bui* or terminfo.bui* since they might incur ncurses dependencies on some platforms, and ncurses just bumped its shlib. Some packages were bumped twice now, sorry for that.
Bump PKGREVISION for ncurses shlib bump.
Needs pdftex.
tex-latex-fonts is in fonts, not in print.
Recursive PKGREVISION bump for all packages mentioning 'perl', having a PKGNAME of p5-*, or depending such a package, for perl-5.22.0.
Reduce tex dependencies. Bump PKGREVISION.
install .oct loadable modules with INSTALL_LIB to avoid stripping them regenerate patch sums in distinfo bump PKGREVISION
Request GNU texinfo as a tool to avoid build failure when it is missing.
Bump for perl-5.20.0. Do it for all packages that * mention perl, or * have a directory name starting with p5-*, or * depend on a package starting with p5- like last time, for 5.18, where this didn't lead to complaints. Let me know if you have any this time.
+LICENSE
Don't multi-line MASTER_SITES.
Recursive PKGREVISION bump for OpenSSL API version bump.
recursive bump from hdf5 shlib major bump.
* .include "../../devel/readline/buildlink3.mk" with USE_GNU_READLINE=yes are replaced with .include "../../devel/readline/buildlink3.mk", and USE_GNU_READLINE are removed, * .include "../../devel/readline/buildlink3.mk" without USE_GNU_READLINE are replaced with .include "../../mk/readline.buildlink3.mk".
Try to fix the fallout caused by the fix for PR pkg/47882. Part 3: Recursively bump package revisions again after the "freetype2" and "fontconfig" handling was fixed.
Bump freetype2 and fontconfig dependencies to current pkgsrc versions, to address issues with NetBSD-6(and earlier)'s fontconfig not being new enough for pango. While doing that, also bump freetype2 dependency to current pkgsrc version. Suggested by tron in PR 47882
Bump all packages for perl-5.18, that a) refer 'perl' in their Makefile, or b) have a directory name of p5-*, or c) have any dependency on any p5-* package Like last time, where this caused no complaints.
"Each sed command should appear in an assignment of its own."
Various MASTER_SITES-related fixes.
Update to Octave 3.6.4 This version is a minor bug fixing release.
Recursive bump for png-1.6.
PKGREVISION bumps for the security/openssl 1.0.1d update.
Revbump after graphics/jpeg and textproc/icu
Fix build of octave on systems with fltk installed (PR47216) "Native graphics" = opengl + fltk, so switching off opengl also switches off fltk.
recursive bump from cyrus-sasl libsasl2 shlib major bump.
Let users install packages from OctaveForge: provide path to GNU make which is assumed there.
Bump all packages that use perl, or depend on a p5-* package, or are called p5-*. I hope that's all of them.
Update to Octave 3.6.3 Mostly bug and documentation fixes.
"user-destdir" is default these days
Update to Octave 3.6.2
Summary of important user-visible changes for version 3.6:
---------------------------------------------------------
** The PCRE library is now required to build Octave. If a pre-compiled
package does not exist for your system, you can find PCRE sources
at http://www.pcre.org
** The ARPACK library is no longer distributed with Octave.
If you need the eigs or svds functions you must provide an
external ARPACK through a package manager or by compiling it
yourself. If a pre-compiled package does not exist for your system,
you can find the current ARPACK sources at
http://forge.scilab.org/index.php/p/arpack-ng
** Many of Octave's binary operators (.*, .^, +, -, ...) now perform
automatic broadcasting for array operations which allows you to use
operator notation instead of calling bsxfun or expanding arrays (and
unnecessarily wasting memory) with repmat or similar idioms. For
example, to scale the columns of a matrix by the elements of a row
vector, you may now write
rv .* M
In this expression, the number of elements of rv must match the
number of columns of M. The following operators are affected:
plus + .+
minus - .-
times .*
rdivide ./
ldivide .\
power .^ .**
lt <
le <=
eq ==
gt >
ge >=
ne != ~=
and &
or |
atan2
hypot
max
min
mod
rem
xor
additionally, since the A op= B assignment operators are equivalent
to A = A op B, the following operators are also affected:
+= -= .+= .-= .*= ./= .\= .^= .**= &= |=
See the "Broadcasting" section in the new "Vectorization and Faster
Code Execution" chapter of the manual for more details.
** Octave now features a profiler, thanks to the work of Daniel Kraft
under the Google Summer of Code mentorship program. The manual has
been updated to reflect this addition. The new user-visible
functions are profile, profshow, and profexplore.
** Overhaul of statistical distribution functions
Functions now return "single" outputs for inputs of class "single".
75% reduction in memory usage through use of logical indexing.
Random sample functions now use the same syntax as rand and accept
a comma separated list of dimensions or a dimension vector.
Functions have been made Matlab-compatible with regard to special
cases (probability on boundaries, probabilities for values outside
distribution, etc.). This may cause subtle changes to existing
scripts.
negative binomial function has been extended to real, non-integer
inputs. The discrete_inv function now returns v(1) for 0 instead of
NaN. The nbincdf function has been recoded to use a closed form
solution with betainc.
** strread, textscan, and textread have been completely revamped.
They now support nearly all Matlab functionality including:
* Matlab-compatible whitespace and delimiter defaults
* Matlab-compatible options: 'whitespace', treatasempty', format
string repeat count, user-specified comment style, uneven-length
output arrays, %n and %u conversion specifiers (provisionally)
** All .m string functions have been modified for better performance or
greater Matlab compatibility. Performance gains of 15X-30X have
been demonstrated. Operations on cell array of strings no longer pay
quite as high a penalty as those on 2-D character arrays.
deblank: Now requires character or cellstr input.
strtrim: Now requires character or cellstr input.
No longer trims nulls ("\0") from string for Matlab
compatibility.
strmatch: Follows documentation precisely and ignores trailing spaces
in pattern and in string. Note that this is documented
Matlab behavior but the implementation apparently does
not always follow it.
substr: Now possible to specify a negative LEN option which
extracts to within LEN of the end of the string.
strtok: Now accepts cellstr input.
base2dec, bin2dec, hex2dec:
Now accept cellstr inputs.
dec2base, dec2bin, dec2hex:
Now accept cellstr inputs.
index, rindex:
Now accept 2-D character array input.
strsplit: Now accepts 2-D character array input.
** Geometry functions derived from Qhull (convhull, delaunay, voronoi)
have been revamped. The options passed to the underlying qhull
command have been changed for better results or for Matlab
compatibility.
convhull: Default options are "Qt" for 2D, 3D, 4D inputs
Default options are "Qt Qx" for 5D and higher
delaunay: Default options are "Qt Qbb Qc Qz" for 2D and 3D inputs
Default options are "Qt Qbb Qc Qx" for 4D and higher
voronoi: No default arguments
** Date/Time functions updated. Millisecond support with FFF format
string now supported.
datestr: Numerical formats 21, 22, 29 changed to match Matlab.
Now accepts cellstr input.
** The following warning IDs have been removed:
Octave:associativity-change
Octave:complex-cmp-ops
Octave:empty-list-elements
Octave:fortran-indexing
Octave:precedence-change
** The warning ID Octave:string-concat has been renamed to
Octave:mixed-string-concat.
** Octave now includes the following Matlab-compatible preference
functions:
addpref getpref ispref rmpref setpref
** The following Matlab-compatible handle graphics functions have been
added:
guidata uipanel uitoolbar
guihandles uipushtool uiwait
uicontextmenu uiresume waitfor
uicontrol uitoggletool
The uiXXX functions above are experimental.
Except for uiwait and uiresume, the uiXXX functions are not
supported with the FLTK+OpenGL graphics toolkit.
The gnuplot graphics toolkit does not support any of the uiXXX
functions nor the waitfor function.
** New keyword parfor (parallel for loop) is now recognized as a valid
keyword. Implementation, however, is still mapped to an ordinary
for loop.
** Other new functions added in 3.6.0:
bicg nthargout usejava
is_dq_string narginchk waitbar
is_sq_string python zscore
is_function_handle register_graphics_toolkit
loaded_graphics_toolkits recycle
** Deprecated functions.
The following functions were deprecated in Octave 3.2 and have been
removed from Octave 3.6.
create_set spcholinv splu
dmult spcumprod spmax
iscommand spcumsum spmin
israwcommand spdet spprod
lchol spdiag spqr
loadimage spfind spsum
mark_as_command sphcat spsumsq
mark_as_rawcommand spinv spvcat
spatan2 spkron str2mat
spchol splchol unmark_command
spchol2inv split unmark_rawcommand
The following functions have been deprecated in Octave 3.6 and will
be removed from Octave 3.10 (or whatever version is the second major
release after 3.6):
cut is_duplicate_entry
cor polyderiv
corrcoef shell_cmd
__error_text__ studentize
error_text sylvester_matrix
** The following functions have been modified for Matlab compatibility:
randperm
PCRE is no longer optional.
More pcre PKGREVISION bumps.
Revbump for a) tiff update to 4.0 (shlib major change) b) glib2 update 2.30.2 (adds libffi dependency to buildlink3.mk) Enjoy.
gsed related clean up.
* Stop to treat NetBSD's sed as GNU sed, not full compatible.
* Then, no need to reset TOOLS_PLATFORM.gsed for NetBSD if USE_TOOLS+=gsed and
real GNU sed is required.
* In addition, convert simple USE_TOOLS+=gsed to conditionally, without NetBSD.
* convert {BUILD_,}DEPENDS+=gsed to USE_TOOLS, all tools from gsed are real gsed.
Force real gsed only on NetBSD.
Convert the remaining few packages that explicitly set DEPENDS or BUILD_DEPENDS on bison to USE_TOOLS=bison. The minimum bison version required in mk/tools/bison.mk is good enough for all of them.
Update to Octave 3.4.3
This makes the package build and work at least in NetBSD on some platforms.
Summary of important user-visible changes for version 3.4.3:
-----------------------------------------------------------
** Octave 3.4.3 is a bug fixing release.
Summary of important user-visible changes for version 3.4.2:
-----------------------------------------------------------
** Octave 3.2.4 fixes some minor installation problems that affected
version 3.4.1.
Summary of important user-visible changes for version 3.4.1:
-----------------------------------------------------------
** Octave 3.4.1 is primarily a bug fixing release.
** IMPORTANT note about binary incompatibility in this release:
Binary compatibility for all 3.4.x releases was originally planned,
but this is impossible for the 3.4.1 release due to a bug in the way
shared libraries were built in Octave 3.4.0. Because of this bug,
.oct files built for Octave 3.4.0 must be recompiled before they
will work with Octave 3.4.1.
Given that there would be binary incompatibilities with shared
libraries going from Octave 3.4.0 to 3.4.1, the following
incompatible changes were also made in this release:
* The Perl Compatible Regular Expression (PCRE) library is now
required to build Octave.
* Octave's libraries and .oct files are now installed in
subdirectories of $libdir instead of $libexecdir.
Any future Octave 3.4.x release versions should remain binary
compatible with Octave 3.4.1 as proper library versioning is now
being used as recommended by the libtool manual.
** The following functions have been deprecated in Octave 3.4.1 and will
be removed from Octave 3.8 (or whatever version is the second major
release after 3.4):
cquad is_duplicate_entry perror strerror
** The following functions are new in 3.4.1:
colstyle gmres iscolumn isrow mgorth nproc rectangle
** The get_forge_pkg function is now private.
** The rectangle_lw, rectangle_sw, triangle_lw, and triangle_sw
functions are now private.
** The logistic_regression_derivatives and logistic_regression_likelihood
functions are now private.
** ChangeLog files in the Octave sources are no longer maintained
by hand. Instead, there is a single ChangeLog file generated from
the Mercurial version control commit messages. Older ChangeLog
information can be found in the etc/OLD-ChangeLogs directory in the
source distribution.
Summary of important user-visible changes for version 3.4:
---------------------------------------------------------
** BLAS and LAPACK libraries are now required to build Octave. The
subset of the reference BLAS and LAPACK libraries has been removed
from the Octave sources.
** The `lookup' function was extended to be more useful for
general-purpose binary searching. Using this improvement, the
ismember function was rewritten for significantly better
performance.
** Real, integer and logical matrices, when used in indexing, will now
cache the internal index_vector value (zero-based indices) when
successfully used as indices, eliminating the conversion penalty for
subsequent indexing by the same matrix. In particular, this means it
is no longer needed to avoid repeated indexing by logical arrays
using find for performance reasons.
** Logical matrices are now treated more efficiently when used as
indices. Octave will keep the index as a logical mask unless the
ratio of true elements is small enough, using a specialized
code. Previously, all logical matrices were always first converted
to index vectors. This results in savings in both memory and
computing time.
** The `sub2ind' and `ind2sub' functions were reimplemented as compiled
functions for better performance. These functions are now faster,
can deliver more economized results for ranges, and can reuse the
index cache mechanism described in previous paragraph.
** The built-in function equivalents to associative operators (`plus',
`times', `mtimes', `and', and `or') have been extended to accept
multiple arguments. This is especially useful for summing
(multiplying, etc.) lists of objects (of possibly distinct types):
matrix_sum = plus (matrix_list{:});
** An FTP object type based on libcurl has been implemented. These
objects allow ftp connections, downloads and uploads to be
managed. For example,
fp = ftp ("ftp.octave.org);
cd (fp, "gnu/octave");
mget (fp, "octave-3.2.3.tar.bz2");
close (fp);
** The default behavior of `assert (observed, expected)' has been
relaxed to employ less strict checking that does not require the
internals of the values to match. This avoids previously valid
tests from breaking due to new internal classes introduced in future
Octave versions.
For instance, all of these assertions were true in Octave 3.0.x
but false in 3.2.x due to new optimizations and improvements:
assert (2*linspace (1, 5, 5), 2*(1:5))
assert (zeros (0, 0), [])
assert (2*ones (1, 5), (2) (ones (1,5)))
** The behavior of library functions `ismatrix', `issquare', and
`issymmetric' has been changed for better consistency.
* The `ismatrix' function now returns true for all numeric,
logical and character 2-D or N-D matrices. Previously, `ismatrix'
returned false if the first or second dimension was zero.
Hence, `ismatrix ([])' was false,
while `ismatrix (zeros (1,2,0))' was true.
* The `issquare' function now returns a logical scalar, and is
equivalent to the expression
ismatrix (x) && ndims (x) == 2 && rows (x) == columns (x)
The dimension is no longer returned. As a result, `issquare ([])'
now yields true.
* The `issymmetric' function now checks for symmetry instead of
Hermitianness. For the latter, ishermitian was created. Also,
logical scalar is returned rather than the dimension, so
`issymmetric ([])' is now true.
** Function handles are now aware of overloaded functions. If a
function is overloaded, the handle determines at the time of its
reference which function to call. A non-overloaded version does not
need to exist.
** Overloading functions for built-in classes (double, int8, cell,
etc.) is now compatible with Matlab.
** Function handles can now be compared with the == and != operators,
as well as the `isequal' function.
** Performance of concatenation (using []) and the functions `cat',
`horzcat', and `vertcat' has been improved for multidimensional
arrays.
** The operation-assignment operators +=, -=, *= and /= now behave more
efficiently in certain cases. For instance, if M is a matrix and S a
scalar, then the statement
M += S;
will operate on M's data in-place if it is not shared by another
variable, usually increasing both time and memory efficiency.
Only selected common combinations are affected, namely:
matrix += matrix
matrix -= matrix
matrix .*= matrix
matrix ./= matrix
matrix += scalar
matrix -= scalar
matrix *= scalar
matrix /= scalar
logical matrix |= logical matrix
logical matrix &= logical matrix
where matrix and scalar belong to the same class. The left-hand
side must be a simple variable reference.
Moreover, when unary operators occur in expressions, Octave will
also try to do the operation in-place if it's argument is a
temporary expresssion.
** The effect of comparison operators (<, >, <=, and >=) applied to
complex numbers has changed to be consistent with the strict
ordering defined by the `max', `min', and `sort' functions. More
specifically, complex numbers are compared by lexicographical
comparison of the pairs `[abs(z), arg(z)]'. Previously, only real
parts were compared; this can be trivially achieved by wrapping the
operands in real().
** The automatic simplification of complex computation results has
changed. Octave will now simplify any complex number with a zero
imaginary part or any complex matrix with all elements having zero
imaginary part to a real value. Previously, this was done only for
positive zeros. Note that the behavior of the complex function is
unchanged and it still produces a complex value even if the
imaginary part is zero.
** As a side effect of code refactoring in liboctave, the binary
logical operations are now more easily amenable to compiler
optimizations and are thus significantly faster.
** Octave now allows user-defined `subsasgn' methods to optimize out
redundant copies. For more information, see the manual.
** More efficient matrix division handling. Octave is now able to
handle the expressions
M' \ V
M.' \ V
V / M
(M is a matrix and V is a vector) more efficiently in certain cases.
In particular, if M is triangular, all three expressions will be
handled by a single call to xTRTRS (from LAPACK), with appropriate
flags. Previously, all three expressions required a physical
transpose of M.
** More efficient handling of certain mixed real-complex matrix
operations. For instance, if RM is a real matrix and CM a complex
matrix,
RM * CM
can now be evaluated either as
complex (RM * real (CM), RM * imag (CM))
or as
complex (RM) * CM,
depending on the dimensions. The first form requires more
temporaries and copying, but halves the FLOP count, which normally
brings better performance if RM has enough rows. Previously, the
second form was always used.
Matrix division is similarly affected.
** More efficient handling of triangular matrix factors returned from
factorizations. The functions for computing QR, LU and Cholesky
factorizations will now automatically return the triangular matrix
factors with proper internal matrix_type set, so that it won't need
to be computed when the matrix is used for division.
** The built-in `sum' function now handles the non-native summation
(i.e., double precision sum of single or integer inputs) more
efficiently, avoiding a temporary conversion of the whole input
array to doubles. Further, `sum' can now accept an extra option
argument, using a compensated summation algorithm rather than a
straightforward sum, which significantly improves precision if lots
of cancellation occurs in the summation.
** The built-in `bsxfun' function now uses optimized code for certain
cases where built-in operator handles are passed in. Namely, the
optimizations concern the operators `plus', `minus', `times',
`ldivide', `rdivide', `power', `and', `or' (for logical arrays),
the relational operators `eq', `ne', `lt', `le', `gt', `ge', and the
functions `min' and `max'. Optimizations only apply when both
operands are of the same built-in class. Mixed real/complex and
single/double operations will first convert both operands to a
common type.
** The `strfind' and `strrep' functions now have compiled
implementations, facilitating significantly more efficient searching
and replacing in strings, especially with longer patterns. The code
of `strcat' has been vectorized and is now much more efficient when
many strings are concatenated. The `strcmpi' and `strncmpi'
functions are now built-in functions, providing better performance.
** Matlab-style ignoring input and output function arguments using
tilde (~) is now supported. Ignored output arguments may be
detected from a function using the built-in function `isargout'.
For more details, consult the manual.
** The list datatype, deprecated since the introduction of cells, has
been removed.
** The accumarray function has been optimized and is now significantly
faster in certain important cases.
** The behavior of isreal and isnumeric functions was changed to be more
Matlab-compatible.
** The integer math & conversion warnings (Octave:int-convert-nan,
Octave:int-convert-non-int-val, Octave:int-convert-overflow,
Octave:int-math-overflow) have been removed.
** rem and mod are now built-in functions. They also handle integer
types efficiently using integer arithmetic.
** Sparse indexing and indexed assignment has been mostly rewritten.
Since Octave uses compressed column storage for sparse matrices,
major attention is devoted to operations manipulating whole columns.
Such operations are now significantly faster, as well as some other
important cases.
Further, it is now possible to pre-allocate a sparse matrix and
subsequently fill it by assignments, provided they meet certain
conditions. For more information, consult the `spalloc' function,
which is no longer a mere dummy. Consequently, nzmax and nnz are no
longer always equal in Octave. Octave may also produce a matrix
with nnz < nzmax as a result of other operations, so you should
consistently use nnz unless you really want to use nzmax (i.e. the
space allocated for nonzero elements).
Sparse concatenation is also affected, and concatenating sparse
matrices, especially larger collections, is now significantly more
efficient. This applies to both the [] operator and the
cat/vertcat/horzcat functions.
** It is now possible to optionally employ the xGESDD LAPACK drivers
for computing the singular value decomposition using svd(), instead
of the default xGESVD, using the configuration pseudo-variable
svd_driver. The xGESDD driver can be up to 6x times faster when
singular vectors are requested, but is reported to be somewhat less
robust on highly ill-conditioned matrices.
** Configuration pseudo-variables, such as page_screen_output or
confirm_recursive_rmdir (or the above mentioned svd_driver), now
accept a "local" option as second argument, requesting the change
to be undone when the current function returns:
function [status, msg] = rm_rf (dir)
confirm_recursive_rmdir (false, "local");
[status, msg] = rmdir (dir, "s");
...
endfunction
Upon return, confirm_recursive_rmdir will be restored to the value
it had on entry to the function, even if there were subsequent
changes to the variable in function rm_rf or any of the functions
it calls.
** pkg now accepts a -forge option for downloading and installing
packages from Octave Forge automatically. For example,
pkg install -forge general
will automatically download the latest release of the general
package and attempt to install it. No automatic resolving of
dependencies is provided. Further,
pkg list -forge
can be used to list all available packages.
** The internal data representation of structs has been completely
rewritten to make certain optimizations feasible. The field data
can now be shared between structs with equal keys but different
dimensions or values, making operations that preserve the fields
faster. Economized storage is now used for scalar structs (just
like most other scalars), making their usage more
memory-efficient. Certain array-like operations on structs
(concatenation, uniform cellfun, num2cell) have gained a
significant speed-up. Additionally, the octave_scalar_map class
now provides a simpler interface to work with scalar structs within
a C++ DLD function.
** Two new formats are available for displaying numbers:
format short eng
format long eng
Both display numbers in engineering notation, i.e., mantissa +
exponent where the exponent is a multiple of 3.
** The following functions are new in Octave 3.4:
accumdim erfcx nfields pqpnonneg uigetdir
bitpack fileread nth_element quadcc uigetfile
bitunpack fminbnd onCleanup randi uiputfile
blkmm fskipl pbaspect repelems uimenu
cbrt ifelse pie3 reset whitebg
curl ishermitian powerset rsf2csf
chop isindex ppder saveas
daspect luupdate ppint strread
divergence merge ppjumps textread
** Using the image function to view images with external programs such
as display, xv, and xloadimage is no longer supported. The
image_viewer function has also been removed.
** The behavior of struct assignments to non-struct values has been
changed. Previously, it was possible to overwrite an arbitrary
value:
a = 1;
a.x = 2;
This is no longer possible unless a is an empty matrix or cell
array.
** The dlmread function has been extended to allow specifying a custom
value for empty fields.
** The dlmread and dlmwrite functions have been modified to accept
file IDs (as returned by fopen) in addition to file names.
** Octave can now optimize away the interpreter overhead of an
anonymous function handle, if the function simply calls another
function or handle with some of its parameters bound to certain
values. Example:
f = @(x) sum (x, 1);
When f is called, the call is forwarded to @sum with the constant 1
appended, and the anonymous function call does not occur on the
call stack.
** Deprecated functions.
The following functions were deprecated in Octave 3.0 and have been
removed from Octave 3.4.
beta_cdf geometric_pdf pascal_pdf
beta_inv geometric_rnd pascal_rnd
beta_pdf hypergeometric_cdf poisson_cdf
beta_rnd hypergeometric_inv poisson_inv
binomial_cdf hypergeometric_pdf poisson_pdf
binomial_inv hypergeometric_rnd poisson_rnd
binomial_pdf intersection polyinteg
binomial_rnd is_bool setstr
chisquare_cdf is_complex struct_contains
chisquare_inv is_list struct_elements
chisquare_pdf is_matrix t_cdf
chisquare_rnd is_scalar t_inv
clearplot is_square t_pdf
clg is_stream t_rnd
com2str is_struct uniform_cdf
exponential_cdf is_symmetric uniform_inv
exponential_inv is_vector uniform_pdf
exponential_pdf isstr uniform_rnd
exponential_rnd lognormal_cdf weibcdf
f_cdf lognormal_inv weibinv
f_inv lognormal_pdf weibpdf
f_pdf lognormal_rnd weibrnd
f_rnd meshdom weibull_cdf
gamma_cdf normal_cdf weibull_inv
gamma_inv normal_inv weibull_pdf
gamma_pdf normal_pdf weibull_rnd
gamma_rnd normal_rnd wiener_rnd
geometric_cdf pascal_cdf
geometric_inv pascal_inv
The following functions were deprecated in Octave 3.2 and will
be removed from Octave 3.6 (or whatever version is the second major
release after 3.2):
create_set spcholinv splu
dmult spcumprod spmax
iscommand spcumsum spmin
israwcommand spdet spprod
lchol spdiag spqr
loadimage spfind spsum
mark_as_command sphcat spsumsq
mark_as_rawcommand spinv spvcat
spatan2 spkron str2mat
spchol splchol unmark_command
spchol2inv split unmark_rawcommand
The following functions have been deprecated in Octave 3.4 and will
be removed from Octave 3.8 (or whatever version is the second major
release after 3.4):
autocor cellidx gammai krylovb values
autocov dispatch glpkmex replot
betai fstat is_global saveimage
* For compatibility with Matlab, mu2lin (x) is now equivalent to
mu2lin (x, 0).
* The ARPACK library is now distributed with Octave so it no longer
needs to be available as an external dependency when building
Octave.
remove incomplete libtoolization which made that plugins were built as executables rather than loadable modules This might cause that the pkg doesn't build on as many platforms as it did before, but it has a chance to work now. bump PKGREV
Recursive bump for graphics/freetype2 buildlink addition.
Not (or perhaps no longer) MAKE_JOBS_SAFE: in doc/, needs a .WAIT between "conf.texi" and "subdirs", but I can't add one because this package uses gmake and gmake has no equivalent functionality.
Revision dump after devel/hdf5 update.
recursive bump from gettext-lib shlib bump.
png shlib name changed for png>=1.5.0, so bump PKGREVISIONs.
"fortran" -> "fortran77" except where it is clear that it isn't F77. "fortran" is alias of "fortran77" for now, but it will change later.
Update to Octave 3.2.4, this is bug fixing release. pkgsrc changes: fix shared library versions.
Recursive PKGREVISION bump for jpeg update to 8.
Follow f2c/libf2c split: bump revision of all packages that list Fortran in used languages.
Changes 3.2.3: * This is a bug-fixing release.
Update to Octave 3.2.2. Changes since previous (3.2.0) are minor bug fixes.
Remove USE_DIRS from pkgsrc. Shared directories can now be created independently by the pacakges needing them and will be removed automatically by pkg_delete when empty. Packages needing empty directories can use the @pkgdir command in PLIST. Discussed and ok'd in thread starting at http://mail-index.netbsd.org/tech-pkg/2009/06/30/msg003546.html
Update to Octave 2.2.0. User-visible changes since previous release: - Compatibility with Matlab graphics has been improved. - New graphics functions. - New experimental OpenGL/FLTK based plotting system. - Functions providing direct access to gnuplot have been removed. - The Control, Finance and Quaternion functions have been removed. - Specific sparse matrix functions removed. - Improvements to the debugger. - Improved traceback error messages. - Object Oriented Programming. - Parsing of Command-style Functions. - Block comments. - Special treatment in the parser of expressions like "a' * b". - Single Precision data type. - Improved array indexing. - Improved memory management. - Improved performance for reduction operations. - Sorting and searching. - Range arithmetics. - Various performance improvements. - 64-bit integer arithmetic. - Diagonal and permutation matrices. - Improvements to fsolve. - Improvements to the norm function. - New functions for computing some eigenvalues or singular values. - New QR and Cholesky factorization updating functions. - New quadrature functions. - New functions for reading and writing images. - Other miscellaneous new functions. - Changes to strcat. - Improvements to the help functions. - Deprecated functions.
Recursive ABI depends update and PKGREVISION bump for readline-6.0 shlib major change. Reported by Robert Elz in PR 41345.
Changes 3.0.5: * Fixed a serious file reading bug. Changes 3.0.4: * Bug-fixing release.
PKGREVISION bump for libsndfile ABI depends bump.
Add DESTDIR support. Approved by <tnn>.
Changes 3.0.3: * Bug fixes * Improvements
Changes 3.0.2: * Bug-fix release.
Changes 3.0.1: * This is a bug-fixing release.
Changes 3.0.0: * Compatibility with Matlab graphics is much better now. We now have some graphics features that work like Matlab's Handle Graphics (tm): * The way Octave handles search paths has changed. * Previous versions of Octave had a number of built-in variables to control warnings (for example, warn_divide_by_zero). These variables have been replaced by warning identifiers that are used with the warning function to control the state of warnings. * All built-in variables have been converted to functions. * For compatibility with Matlab, the output order of Octave's "system" function has changed. * For compatibility with Matlab, the output of Octave's fsolve function has been changed. * For compatibility with Matlab, normcdf, norminv, normpdf, and normrnd have been modified to compute distributions using the standard deviation instead of the variance. * For compatibility with Matlab, gamcdf, gaminv, gampdf, gamrnd, expcdf, expinv, exppdf and exprnd have been modified to compute the distributions using the standard scale factor rather than one over the scale factor.
Removed ftp.eos.hokudai.ac.jp from MASTER_SITES, doesn't resolve anymore in DNS. Mentioned by Zafer Aydogan in PR pkg/37318.
PR#36479 fix plus pkglint cosmetics
PKGREVISION bump for flac shlib major bump and corresponding ABI depends bump.
Use find -print | xargs rather than find -exec.
Update MASTER_SITES and/or HOMEPAGE, from Sergey Svishchev.
Changes 2.1.73: * Bug fixes
* Nuke all references to and definitions of INFO_DIR in package Makefiles and replace with appropriate references to PKGINFODIR instead. * Properly account for split info files during installation. * Move info file listings directly into the package PLISTs. This fixes info-file-related PLIST problems.
Remove extraneous (and incorrect) .endfor.
Generated info files may no longer be split, so handle this fact when installing the liboctave info files.
* Teach the tools framework how to supply the pkgsrc version of
makeinfo if no native makeinfo executable exists. Honor TEXINFO_REQD
when determining whether the native makeinfo can be used.
* Remove USE_MAKEINFO and replace it with USE_TOOLS+=makeinfo.
* Get rid of all the "split" argument deduction for makeinfo since
the PLIST module already handles varying numbers of split info files
correctly.
NOTE: Platforms that have "makeinfo" in the base system should check
that the makeinfo entries of pkgsrc/mk/tools.${OPSYS}.mk are
correct.
Recursive revision bump / recommended bump for gettext ABI change.
Fixed pkglint warnings. The warnings are mostly quoting issues, for
example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some
other changes are outlined in
http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
Changes 2.1.72: * Bug fixes * Improvements
Changes 2.1.71: * Bug fixes
update to 2.1.71 changes: cleanup, build system fixes
Set a directory name in PLIST to a correct value on Linux.
Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: USE_GNU_TOOLS -> USE_TOOLS awk -> gawk m4 -> gm4 make -> gmake sed -> gsed yacc -> bison
Changes 2.1.70: * Bug fixes
Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used.
Changes 2.1.69: * Bug fixes
Remove FreeBSD RCS Ids. pkgsrc has diverged too much for syncing to be useful.
Nuke USE_FORTRAN and bring the f2c handling within the mk/compiler
framework. The list of changes include:
* Modify compiler.mk so that "c" is always prepended to USE_LANGUAGES,
so we no longer need to say it in package Makefiles. Packages
should now append to USE_LANGUAGES instead of setting it.
* Create mk/compiler/f2c.mk which implements another pseudo-compiler
"f2c" that may be used with any C compiler backend, e.g.
PKGSRC_COMPILER= f2c ccache gcc
* Teach the various "real" compiler files, e.g., sunpro.mk, mipspro.mk,
etc., to use f2c if the native Fortran compiler isn't present.
Packages that use Fortran should now simply include the line:
USE_LANGUAGES+= fortran
in the package Makefile.
Libtool fix for PR pkg/26633, and other issues. Update libtool to 1.5.10 in the process. (More information on tech-pkg.) Bump PKGREVISION and BUILDLINK_DEPENDS of all packages using libtool and installing .la files. Bump PKGREVISION (only) of all packages depending directly on the above via a buildlink3 include.
Replace RPATH_FLAG with LINKER_RPATH_FLAG and COMPILER_RPATH_FLAG,
which are the full option names used to set rpath directives for the
linker and the compiler, respectively. In places were we are invoking
the linker, use "${LINKER_RPATH_FLAG} <path>", where the space is
inserted in case the flag is a word, e.g. -rpath. The default values
of *_RPATH_FLAG are set by the compiler/*.mk files, depending on the
compiler that you use. They may be overridden on a ${OPSYS}-specific
basis by setting _OPSYS_LINKER_RPATH_FLAG and _OPSYS_COMPILER_RPATH_FLAG,
respectively. Garbage-collect _OPSYS_RPATH_NAME and _COMPILER_LD_FLAG.
Convert to buildlink3.
PKGREVISION bump after openssl-security-fix-update to 0.9.6m. Buildlink files: RECOMMENDED version changed to current version.
Include "../../mk/compiler.mk" to get the value of CC_VERSION before testing it.
CC_VERSION is "gcc-2.8.1" for egcs. Also fix up a few nits: not all compilers understand "-O" to optimize, and if we only care about gcc, then wrap the block in an ifdef that is triggered only if we're using gcc.
Use $FIND with "-print". Noted by Georg Schwarz in PR pkg/24248
replace deprecated USE_GMAKE with USE_GNU_TOOLS+=make.
Adjust dependancies and bump PKGREVISION due to: - teTeX 1.0.x packages have been moved to teTeX1* directories. - teTeX 2.0.x packages have been moved to teTeX* directories and their base name has been changed to teTeX (instead of teTeX2).
Use compiler.mk logic, fixing systems with a non-GCC compiler.
simplify last a little.
Unfortunately, octave will not build with gcc>=3.0 (and we really do not want to patch all this), so bail out if we detect a gcc-3 compiler. Suggest octave-current instead. Closes my own PR pkg/21874. While here, allow dependecy on either ghostscript or ghostscript-nox11.
Permit teTeX2 as well as teTeX for BUILD_DEPENDS.
USE_NEW_TEXINFO is unnecessary now.
Convert to USE_NEW_TEXINFO. Remove now unnecessary patch files.
s/netbsd.org/NetBSD.org/
Update to version 2.0.17. Convert to using buildlink. Summary of changes for version 2.0.17: ------------------------------------- This will probably be the last release in the 2.0.x series. There are a few bug fixes, but the major change is to print a message saying that Octave 2.0.x cannot be compiled with gcc 3.0.x or gcc 2.96. If you want to build Octave 2.0.x, you will need to use gcc 2.95.x. If you want to use gcc 3.0.x or some later version, you should be using the Octave 2.1.35 sources or a more recent version.
Use tech-pkg@ in favor of packages@ as MAINTAINER for orphaned packages. Should anybody feel like they could be the maintainer for any of thewe packages, please adjust.
(1) Publicly export the value of _OPSYS_RPATH_NAME as RPATH_FLAG;
Makefiles simply need to use this value often, for better or for
worse.
(2) Create a new variable FIX_RPATH that lists variables that should
be cleansed of -R or -rpath values if ${_USE_RPATH} is "no". By
default, FIX_RPATH contains LIBS, X11_LDFLAGS, and LDFLAGS, and
additional variables may be appended from package Makefiles.
Give all packages which depend on "png" a version bump, and update all dependencies on packages depending on "png" which contain shared libraries, all for the (imminent) update to the "png" package. [List courtesy of John Darrow, courtesy of "bulk-build".]
Introduce new framework for handling info files generation and installation.
Summary of changes:
- removal of USE_GTEXINFO
- addition of mk/texinfo.mk
- inclusion of this file in package Makefiles requiring it
- `install-info' substituted by `${INSTALL_INFO}' in PLISTs
- tuning of mk/bsd.pkg.mk:
removal of USE_GTEXINFO
INSTALL_INFO added to PLIST_SUBST
`${INSTALL_INFO}' replace `install-info' in target rules
print-PLIST target now generate `${INSTALL_INFO}' instead of `install-info'
- a couple of new patch files added for a handful of packages
- setting of the TEXINFO_OVERRIDE "switch" in packages Makefiles requiring it
- devel/cssc marked requiring texinfo 4.0
- a couple of packages Makefiles were tuned with respect of INFO_FILES and
makeinfo command usage
See -newly added by this commit- section 10.24 of Packages.txt for
further information.
Be a bit more tolerant about the teTeX package version it depends for build.
CPPFLAGS is now passed to MAKE_ENV and CONFIGURE_ENV by bsd.pkg.mk, so adapt by moving CPPFLAGS settings to top-level, and removing explicit inclusion of CPPFLAGS into MAKE_ENV and CONFIGURE_ENV.
Use ${XARGS} instead of invoking xargs directly.
Delete the prebuilt info files after extraction so that they get regenerated and work properly with the info program in NetBSD. Fixes PR pkg/12962 by Jim Bernard <jbernard@mines.edu>.
make sure this configures and builds correctly with either f77 or f2c.
Added CONFLICTS to octave-2.1.*
Change BUILD_DEPENDS semantics: first component is now a package name+version/pattern, no more executable/patchname/whatnot. While there, introduce BUILD_USES_MSGFMT as shorthand to pull in devel/gettext unless /usr/bin/msgfmt exists (i.e. on post-1.5 -current). Patch by Alistair Crooks <agc@netbsd.org>
gnuplot>=3.7
Cleanup MKDIR usage => INSTALL_*_DIR XXX need to teach pkglint to be more picky about this
Update to new COMMENT style: COMMENT var in Makefile instead of pkg/COMMENT.
Move the include of mk/bsd.pkg.mk to the end so post-patch doesn't cause make warnings and change the way EGCS_VERSION is defined.
USE_PKGLIBTOOL -> USE_LIBTOOL
s/USE_LIBTOOL/USE_PKGLIBTOOL/ Add a new USE_LIBTOOL definition that uses the libtool package instead of pkglibtool which is now considered outdated. USE_PKGLIBTOOL is available for backwards compatibility with old packages but is deprecated for new packages.
Updated octave to 2.0.16.
Changes since 2.0.13: (besides numerous bug fixes)
- New math functions: besselh, airy
- New functions: is_complex, isnumeric, isfinite, rehash, graw
- The Bessel functions now accept complex values for the argument
and any real value for the order.
- New "finance" category
- ~30 new functions in "signal"
- Numerous new functions in "statistics" category, including
new "distributions", "models", and "tests" directories
- If LOADPATH contains a doubled colon, the default path is inserted
in its place. This is similar to the substitution that also takes
place for leading or trailing colons in the LOADPATH.
- Loops of the form `for i = STRING ... endfor' are now allowed.
... and much more.
Closes PR8421.
space removed
added USE_FORTRAN for control of the fortran compiler
Use a relative path for bsd.pkg.mk instead of relying on the search path.
Include bsd.prefs.mk before using ${CC} in a != assignment, just in case
CC is set to something non-standard.
add USE_X11=yes
This pkg doesn't actually use Curses, so build with libtermcap instead.
GNU plot is now at v.3.7. Depend on that version.
Reflect update of f2c.
If "egcs" is installed apply Rene Hexel's patch and use "g77" instead of "f2c" as fortran compiler.
Remove debugging statement.
Don't attempt to build package if egcs is installed.
Remove unnecessary FreeBSD remainders, make sure ncurses gets found and force usage of "f2c" if "g77" (egcs) is present.
NetBSD patches supplied by Rene Hexel in PR pkg/6476.
Initial import of FreeBSD's "octave" port: High-level interactive language for numerical computations.
Initial revision