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CVS log for pkgsrc/parallel/openmpi/PLIST

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Default branch: MAIN

Revision 1.20 / (download) - annotate - [select for diffs], Thu Aug 25 22:09:14 2022 UTC (15 months, 1 week ago) by thor
Branch: MAIN
CVS Tags: pkgsrc-2023Q3-base, pkgsrc-2023Q3, pkgsrc-2023Q2-base, pkgsrc-2023Q2, pkgsrc-2023Q1-base, pkgsrc-2023Q1, pkgsrc-2022Q4-base, pkgsrc-2022Q4, pkgsrc-2022Q3-base, pkgsrc-2022Q3, HEAD
Changes since 1.19: +118 -323 lines
Diff to previous 1.19 (colored)

parallel/openmpi: update to 4.1.4

This is a long overdue update with some refinements, notably
default-on f90 option.

We skipped some major releases, so please excuse me not including
the whole changelog. See for more information.

Revision 1.19 / (download) - annotate - [select for diffs], Thu Jan 4 20:31:28 2018 UTC (5 years, 10 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2022Q2-base, pkgsrc-2022Q2, pkgsrc-2022Q1-base, pkgsrc-2022Q1, pkgsrc-2021Q4-base, pkgsrc-2021Q4, pkgsrc-2021Q3-base, pkgsrc-2021Q3, pkgsrc-2021Q2-base, pkgsrc-2021Q2, pkgsrc-2021Q1-base, pkgsrc-2021Q1, pkgsrc-2020Q4-base, pkgsrc-2020Q4, pkgsrc-2020Q3-base, pkgsrc-2020Q3, pkgsrc-2020Q2-base, pkgsrc-2020Q2, pkgsrc-2020Q1-base, pkgsrc-2020Q1, pkgsrc-2019Q4-base, pkgsrc-2019Q4, pkgsrc-2019Q3-base, pkgsrc-2019Q3, pkgsrc-2019Q2-base, pkgsrc-2019Q2, pkgsrc-2019Q1-base, pkgsrc-2019Q1, pkgsrc-2018Q4-base, pkgsrc-2018Q4, pkgsrc-2018Q3-base, pkgsrc-2018Q3, pkgsrc-2018Q2-base, pkgsrc-2018Q2, pkgsrc-2018Q1-base, pkgsrc-2018Q1
Changes since 1.18: +13 -12 lines
Diff to previous 1.18 (colored)

openmpi: updated to 1.10.7

- Fix bug in TCP BTL that impacted performance on 10GbE (and faster)
  networks by not adjusting the TCP send/recv buffer sizes and using
  system default values
- Add missing MPI_AINT_ADD and MPI_AINT_DIFF function delcarations in
- Fixed time reported by MPI_WTIME; it was previously reported as
  dependent upon the CPU frequency.
- Fix platform detection on FreeBSD
- Fix a bug in the handling of MPI_TYPE_CREATE_DARRAY in
- Fix openib memory registration limit calculation
- Add missing MPI_T_PVAR_SESSION_NULL in mpi.h
- Fix "make distcheck" when using external hwloc and/or libevent packages
- Add latest ConnectX-5 vendor part id to OpenIB device params
- Fix race condition in the UCX PML
- Fix signal handling for rsh launcher
- Fix Fortran compilation errors by removing MPI_SIZEOF in the Fortran
  interfaces when the compiler does not support it
- Fixes for the pre-ignore-TKR "mpi" Fortran module implementation
  (i.e., for older Fortran compilers -- these problems did not exist
  in the "mpi" module implementation for modern Fortran compilers):
  - Add PMPI_* interfaces
  - Fix typo in MPI_FILE_WRITE_AT_ALL_BEGIN interface name
  - Fix typo in MPI_FILE_READ_ORDERED_BEGIN interface name
- Fixed the type of MPI_DISPLACEMENT_CURRENT in all Fortran interfaces
- Fixed typos in MPI_INFO_GET_* man pages.  Thanks to Nicolas Joly for
  the patch
- Fix typo bugs in wrapper compiler script

Revision 1.18 / (download) - annotate - [select for diffs], Mon Jan 1 22:29:51 2018 UTC (5 years, 11 months ago) by rillig
Branch: MAIN
Changes since 1.17: +24 -24 lines
Diff to previous 1.17 (colored)

Sort PLIST files.

Unsorted entries in PLIST files have generated a pkglint warning for at
least 12 years. Somewhat more recently, pkglint has learned to sort
PLIST files automatically. Since pkglint 5.4.23, the sorting is only
done in obvious, simple cases. These have been applied by running:

  pkglint -Cnone,PLIST -Wnone,plist-sort -r -F

Revision 1.17 / (download) - annotate - [select for diffs], Mon Feb 6 04:19:12 2017 UTC (6 years, 9 months ago) by markd
Branch: MAIN
CVS Tags: pkgsrc-2017Q4-base, pkgsrc-2017Q4, pkgsrc-2017Q3-base, pkgsrc-2017Q3, pkgsrc-2017Q2-base, pkgsrc-2017Q2, pkgsrc-2017Q1-base, pkgsrc-2017Q1
Changes since 1.16: +14 -3 lines
Diff to previous 1.16 (colored)

Fix PLIST for linux.

Revision 1.16 / (download) - annotate - [select for diffs], Sun Dec 25 23:57:45 2016 UTC (6 years, 11 months ago) by markd
Branch: MAIN
CVS Tags: pkgsrc-2016Q4-base, pkgsrc-2016Q4
Changes since 1.15: +31 -1 lines
Diff to previous 1.15 (colored)

PLIST catchup for recent update.

Revision 1.15 / (download) - annotate - [select for diffs], Sun Dec 13 06:49:01 2015 UTC (7 years, 11 months ago) by markd
Branch: MAIN
CVS Tags: pkgsrc-2016Q3-base, pkgsrc-2016Q3, pkgsrc-2016Q2-base, pkgsrc-2016Q2, pkgsrc-2016Q1-base, pkgsrc-2016Q1, pkgsrc-2015Q4-base, pkgsrc-2015Q4
Changes since 1.14: +237 -3 lines
Diff to previous 1.14 (colored)

Add a java option.
Fix PLIST for the sge option.
Fix PLIST for linux.

Revision 1.14 / (download) - annotate - [select for diffs], Sat Dec 12 22:41:19 2015 UTC (7 years, 11 months ago) by asau
Branch: MAIN
Changes since 1.13: +175 -78 lines
Diff to previous 1.13 (colored)

Update to OpenMPI 1.10.1



- Workaround an optimization problem with gcc compilers >= 4.9.2 that
  causes problems with memory registration, and forced
  mpi_leave_pinned to default to 0 (i.e., off).  Thanks to @oere for
  the fix.
- Fix use of MPI_LB and MPI_UB in subarray and darray datatypes.
  Thanks to Gus Correa and Dimitar Pashov for pointing out the issue.
- Minor updates to mpi_show_mpi_alloc_mem_leaks and
  ompi_debug_show_handle_leaks functionality.
- Fix segv when invoking non-blocking reductions with a user-defined
  operation.  Thanks to Rupert Nash and Georg Geiser for identifying
  the issue.
- No longer probe for PCI topology on Solaris (unless running as root).
- Fix for Intel Parallel Studio 2016 ifort partial support of the
  !GCC$ pragma.  Thanks to Fabrice Roy for reporting the problem.
- Bunches of Coverity / static analysis fixes.
- Fixed ROMIO to look for lstat in <sys/stat.h>.  Thanks to William
  Throwe for submitting the patch both upstream and to Open MPI.
- Fixed minor memory leak when attempting to open plugins.
- Fixed type in MPI_IBARRIER C prototype.  Thanks to Harald Servat for
  reporting the issue.
- Add missing man pages for MPI_WIN_CREATE_DYNAMIC, MPI_WIN_ATTACH,
- When mpirun-launching new applications, only close file descriptors
  that are actually open (resulting in a faster launch in some
- Fix "test ==" issues in Open MPI's configure script.  Thank to Kevin
  Buckley for pointing out the issue.
- Fix performance issue in usnic BTL: ensure progress thread is
  throttled back to not aggressively steal CPU cycles.
- Fix cache line size detection on POWER architectures.
- Add missing #include in a few places.  Thanks to Orion Poplawski for
  supplying the patch.
- When OpenSHMEM building is disabled, no longer install its header
  files, help files, or man pages.  Add man pages for oshrun, oshcc,
  and oshfort.
- Fix mpi_f08 implementations of MPI_COMM_SET_INFO, and profiling
- Add orte_rmaps_dist_device MCA param, allowing users to map near a
  specific device.
- Various updates/fixes to the openib BTL.
- Add missing defaults for the Mellanox ConnectX 3 card to the openib BTL.
- Minor bug fixes in the OFI MTL.
- Various updates to Mellanox's MXM, hcoll, and FCA components.
- Add OpenSHMEM man pages.  Thanks to Tony Curtis for sharing the man
  pages files from
- Add missing "const" attributes to MPI_COMPARE_AND_SWAP,
  Thanks to Michael Knobloch and Takahiro Kawashima for bringing this
  to our attention.
- Fix linking issues on some platforms (e.g., SLES 12).
- Fix hang on some corner cases when MPI applications abort.
- Add missing options to mpirun man page. Thanks to Daniel Letai
  for bringing this to our attention.
- Add new --with-platform-patches-dir configure option
- Adjust relative selection priorities to ensure that MTL
  support is favored over BTL support when both are available
- Use CUDA IPC for all sized messages for performance

** NOTE: The v1.10.0 release marks the transition to Open MPI's new
** version numbering scheme.  The v1.10.x release series is based on
** the v1.8.x series, but with a few new features.  v2.x will be the
** next series after the v1.10.x series, and complete the transition
** to the new version numbering scheme.  See README for more details
** on the new versioning scheme.
** NOTE: In accordance with OMPI version numbering, the v1.10 is *not*
** API compatible with the v1.8 release series.

- Added libfabric support (see README for more details):
  - usNIC BTL updated to use libfabric.
  - Added OFI MTL (usable with PSM in libfabric v1.1.0).
- Added Intel Omni-Path support via new PSM2 MTL.
- Added "yalla" PML for faster MXM support.
- Removed support for MX
- Added persistent distributed virtual machine (pDVM) support for fast
  workflow executions.
- Fixed typo in GCC inline assembly introduced in Open MPI v1.8.8.
  Thanks to Paul Hargrove for pointing out the issue.
- Add missing man pages for MPI_Win_get|set_info(3).
- Ensure that session directories are cleaned up at the end of a run.
- Fixed linking issues on some OSs where symbols of dependent
  libraries are not automatically publicly available.
- Improve hcoll and fca configury library detection.  Thanks to David
  Shrader for helping track down the issue.
- Removed the LAMA mapper (for use in setting affinity).  Its
  functionality has been largely superseded by other mpirun CLI
- CUDA: Made the asynchronous copy mode be the default.
- Fix a malloc(0) warning in MPI_IREDUCE_SCATTER_BLOCK.  Thanks to
  Lisandro Dalcin for reporting the issue.
- Fix typo in MPI_Scatter(3) man page.  Thanks to Akshay Venkatesh for
  noticing the mistake.
- Add rudimentary protection from TCP port scanners.
- Fix typo in Open MPI error handling.  Thanks to e Sandgren for
  pointing out the error.
- Increased the performance of the CM PML (i.e., the Portals, PSM,
  PSM2, MXM, and OFI transports).
- Restored visibility of blocking send requests in message queue
  debuggers (e.g., TotalView, DDT).
- Fixed obscure IPv6-related bug in the TCP BTL.
- Add support for the "no_locks" MPI_Info key for one-sided
- Fixed ibv_fork support for verbs-based networks.
- Fixed a variety of small bugs in OpenSHMEM.
- Fixed MXM configure with additional CPPFLAGS and LDFLAGS.  Thanks to
  David Shrader for the patch.
- Fixed incorrect memalign threshhold in the openib BTL.  Thanks to
  Xavier Besseron for pointing out the issue.


- Fix a segfault in MPI_FINALIZE with the PSM MTL.
- Fix mpi_f08 sentinels (e.g., MPI_STATUS_IGNORE) handling.
- Set some additional MXM default values for OSHMEM.
- Fix an invalid memory access in MPI_MRECV and MPI_IMRECV.
- Include two fixes that were mistakenly left out of the official
  v1.8.7 tarball:
  - Fixed MPI_WIN_POST and MPI_WIN_START for zero-size messages
  - Protect the OOB TCP ports from segfaulting when accessed by port

** NOTE: v1.8.7 technically breaks ABI with prior versions
** in the 1.8 series because it repairs two incorrect API
** signatures. However, users will only need to recompile
** if they were using those functions - which they couldn't
** have been, because the signatures were wrong :-)

- Plugged a memory leak that impacted blocking sends
- Fixed incorrect declaration for MPI_T_pvar_get_index and added
  missing return code MPI_T_INVALID_NAME.
- Fixed an uninitialized variable in PMI2 support
- Added new vendor part id for Mellanox ConnectX4-LX
- Fixed NBC_Copy for legitimate zero-size messages
- Fixed MPI_Win_post and MPI_Win_start for zero-size messages
- Protect the OOB ports from segfaulting when accessed by port scanners
- Fixed several Fortran typos
- Fixed configure detection of XRC support
- Fixed support for highly heterogeneous systems to avoid
  memory corruption when printing out the bindings


- Fixed memory leak on Mac OS-X exposed by TCP keepalive
- Fixed keepalive support to ensure that daemon/node failure
  results in complete job cleanup
- Update Java binding support
- Fixed MPI_THREAD_MULTIPLE bug in vader shared memory BTL
- Fixed issue during shutdown when CUDA initialization wasn't complete
- Fixed orted environment when no prefix given
- Fixed trivial typo in MPI_Neighbor_allgather manpage
- Fixed tree-spawn support for sh and ksh shells
- Several data type fixes


- Fixed configure problems in some cases when using an external hwloc
  installation.  Thanks to Erick Schnetter for reporting the error and
  helping track down the source of the problem.
- Fixed linker error on OS X when using the clang compiler.  Thanks to
  Erick Schnetter for reporting the error and helping track down the
  source of the problem.
- Fixed MPI_THREAD_MULTIPLE deadlock error in the vader BTL.  Thanks
  to Thomas Klimpel for reporting the issue.
- Fixed several Valgrind warnings.  Thanks for Lisandro Dalcin for
  contributing a patch fixing some one-sided code paths.
- Fixed version compatibility test in OOB that broke ABI within the
  1.8 series. NOTE: this will not resolve the problem between pre-1.8.5
  versions, but will fix it going forward.
- Fix some issues related to running on Intel Xeon Phi coprocessors.
- Opportunistically switch away from using GNU Libtool's libltdl
  library when possible (by default).
- Fix some VampirTrace errors.  Thanks to Paul Hargrove for reporting
  the issues.
- Correct default binding patterns when --use-hwthread-cpus was
  specified and nprocs <= 2.
- Fix warnings about -finline-functions when compiling with clang.
- Updated the embedded hwloc with several bug fixes, including the
  "duplicate Lhwloc1 symbol" that multiple users reported on some
- Do not error when mpirun is invoked with with default bindings
  (i.e., no binding was specified), and one or more nodes do not
  support bindings.  Thanks to Annu Desari for pointing out the
- Let root invoke "mpirun --version" to check the version without
  printing the "Don't run as root!" warnings.  Thanks to Robert McLay
  for the suggestion.
- Fixed several bugs in OpenSHMEM support.
- Extended vader shared memory support to 32-bit architectures.
- Fix handling of very large datatypes.  Thanks to Bogdan Sataric for
  the bug report.
- Fixed a bug in handling subarray MPI datatypes, and a bug when using
  MPI_LB and MPI_UB.  Thanks to Gus Correa for pointing out the issue.
- Restore user-settable bandwidth and latency PML MCA variables.
- Multiple bug fixes for cleanup during MPI_FINALIZE in unusual
- Added support for TCP keepalive signals to ensure timely termination
  when sockets between daemons cannot be created (e.g., due to a
- Added MCA parameter to allow full use of a SLURM allocation when
  started from a tool (supports LLNL debugger).
- Fixed several bugs in the configure logic for PMI and hwloc.
- Fixed incorrect interface index in TCP communications setup.  Thanks
  to Mark Kettenis for spotting the problem and providing a patch.
- Fixed MPI_IREDUCE_SCATTER with single-process communicators when
  MPI_IN_PLACE was not used.
- Added XRC support for OFED v3.12 and higher.
- Various updates and bug fixes to the Mellanox hcoll collective
- Fix problems with Fortran compilers that did not support
  REAL*16/COMPLEX*32 types.  Thanks to Orion Poplawski for identifying
  the issue.
- Fixed problem with rpath/runpath support in pkg-config files.
  Thanks to Christoph Junghans for notifying us of the issue.
- Man page fixes:
  - Removed erroneous "color" discussion from MPI_COMM_SPLIT_TYPE.
    Thanks to Erick Schnetter for spotting the outdated text.
  - Fixed prototypes for MPI_IBARRIER.  Thanks to Maximilian for
    finding the issue.
  - Updated docs about buffer usage in non-blocking communications.
    Thanks to Alexander Pozdneev for citing the outdated text.
  - Added documentation about the 'ompi_unique' MPI_Info key with
  - Fixed typo in MPI_INTERCOMM_MERGE.  Thanks to Harald Servat for
    noticing and sending a patch.
  - Updated configure paths in HACKING.  Thanks to Maximilien Levesque
    for the fix.
  - Fixed Fortran typo in MPI_WIN_LOCK_ALL.  Thanks to Thomas Jahns
    for pointing out the issue.
- Fixed a number of MPI one-sided bugs.
- Fixed MPI_COMM_SPAWN when invoked from a singleton job.
- Fixed a number of minor issues with CUDA support, including
  registering of shared memory and supporting reduction support for
  GPU buffers.
- Improved support for building OMPI on Cray platforms.
- Fixed performance regression introduced by the inadvertent default
  enabling of MPI_THREAD_MULTIPLE support.


- Fix MPI_SIZEOF; now available in mpif.h for modern Fortran compilers
  (see README for more details).  Also fixed various compiler/linker
- Fixed inadvertant Fortran ABI break between v1.8.1 and v1.8.2 in the
  mpi interface module when compiled with gfortran >= v4.9.
- Fix various MPI_THREAD_MULTIPLE issues in the TCP BTL.
- mpirun no longer requires the --hetero-nodes switch; it will
  automatically detect when running in heterogeneous scenarios.
- Update LSF support, to include revamped affinity functionality.
- Update embedded hwloc to v1.9.1.
- Fixed max registerable memory computation in the openib BTL.
- Updated error message when debuggers are unable to find various
  symbols/types to be more clear.  Thanks to Dave Love for raising the
- Added proper support for LSF and PBS/Torque libraries in static builds.
- Rankfiles now support physical processor IDs.
- Fixed potential hang in MPI_ABORT.
- Fixed problems with the PSM MTL and "re-connect" scenarios, such as
- Fix MPI_IREDUCE_SCATTER with a single process.
- Fix (rare) race condition in stdout/stderr funneling to mpirun where
  some trailing output could get lost when a process terminated.
- Removed inadvertent change that set --enable-mpi-thread-multiple "on"
  by default, thus impacting performance for non-threaded apps.
- Significantly reduced startup time by optimizing internal hash table
- Fixed OS X linking with the Fortran mpi module when used with
  gfortran >= 4.9.  Thanks to Github user yafshar for raising the
- Fixed memory leak on Cygwin platforms.  Thanks for Marco Atzeri for
  reporting the issue.
- Fixed seg fault in neighborhood collectives when the degree of the
  topology is higher than the communicator size.  Thanks to Lisandro
  Dalcin for reporting the issue.
- Fixed segfault in neighborhood collectives under certain use-cases.
- Fixed various issues regarding Solaris support.  Thanks to Siegmar
  Gross for patiently identifying all the issues.
- Fixed PMI configure tests for certain Slurm installation patterns.
- Fixed param registration issue in Java bindings.  Thanks to Takahiro
  Kawashima and Siegmar Gross for identifying the issue.
- Several man page fixes.
- Silence several warnings and close some memory leaks (more remain,
  but it's better than it was).
- Re-enabled the use of CMA and knem in the shared memory BTL.
- Updated mpirun manpage to correctly explain new map/rank/binding options.
- Fixed MPI_IALLGATHER problem with intercommunicators.  Thanks for
  Takahiro Kawashima for the patch.
- Numerous updates and performance improvements to OpenSHMEM.
- Turned off message coalescing in the openib BTL until a proper fix
  for that capability can be provided (tentatively expected for 1.8.5)
- Fix a bug in iof output that dates back to the dinosaurs which would
  output extra bytes if the system was very heavily loaded
- Fix a bug where specifying mca_component_show_load_errors=0 could
  cause ompi_info to segfault
- Updated valgrind suppression file


- Fixed application abort bug to ensure that MPI_Abort exits appropriately
  and returns the provided exit status
- Fixed some alignment (not all) issues identified by Clang
- Allow CUDA-aware to work with nonblocking collectives. Forces packing to
  happen when using GPU buffers.
- Fixed configure test issue with Intel 2015 Fortran compiler
- Fixed some PGI-related errors
- Provide better help message when encountering a firewall
- Fixed MCA parameter quoting to protect multi-word params and params
  that contain special characters
- Improved the bind-to help message to clarify the defaults
- Add new MPI-3.1 tools interface
- Several performance optimizations and memory leak cleanups
- Turn off the coll/ml plugin unless specifically requested as it
  remains in an experimental state
- Fix LSF support by adding required libraries for the latest LSF
  releases.  Thanks to Joshua Randal for supplying the initial


- Fix auto-wireup of OOB, allowing ORTE to automatically
  test all available NICs
- "Un-deprecate" pernode, npernode, and npersocket options
  by popular demand
- Add missing Fortran bindings for MPI_WIN_LOCK_ALL,
- Fix cascading/over-quoting in some cases with the rsh/ssh-based
  launcher.  Thanks to multiple users for raising the issue.
- Properly add support for gfortran 4.9 ignore TKR pragma (it was
  erroneously only partially added in v1.7.5).  Thanks to Marcus
  Daniels for raising the issue.
- Update/improve help messages in the usnic BTL.
- Resolve a race condition in MPI_Abort.
- Fix obscure cases where static linking from wrapper compilers would
- Clarify the configure --help message about when OpenSHMEM is
  enabled/disabled by default.  Thanks to Paul Hargrove for the
- Align pages properly where relevant.  Thanks to Paul Hargrove for
  identifying the issue.
- Various compiler warning and minor fixes for OpenBSD, FreeBSD, and
  Solaris/SPARC.  Thanks to Paul Hargrove for the patches.
- Properly pass function pointers from Fortran to C in the mpi_f08
  module, thereby now supporting gfortran 4.9.  Thanks to Tobias
  Burnus for assistance and testing with this issue.
- Improve support for Cray CLE 5.
- Fix mpirun regression: ensure exit status is non-zero if mpirun is
  terminated due to signal.
- Improved CUDA efficiency of asynchronous copies.
- Fix to parameter type in MPI_Type_indexed.3.  Thanks to Bastian
  Beischer for reporting the mistake.
- Fix NUMA distance calculations in the openib BTL.
- Decrease time required to shut down mpirun at the end of a job.
- More RMA fixes.
- More hostfile fixes from Tetsuya Mishima.
- Fix darray issue where UB was not computed correctly.
- Fix mpi_f08 parameter name for MPI_GET_LIBRARY_VERSION.  Thanks to
  Junchao Zhang for pointing out the issue.
- Ensure mpirun aborts properly when unable to map processes in
  scheduled environments.
- Ensure that MPI RMA error codes show up properly.  Thanks to
  Lisandro Dalcin for reporting the issue.
- Minor bug fixes and improvements to the bash and zsh mpirun
  autocompletion scripts.
- Fix sequential mpirun process mapper.  Thanks to Bill Chen for
  reporting the issue.
- Correct SLURM stdout/stderr redirection.
- Added missing portals 4 files.
- Performance improvements for blocking sends and receives.
- Lots of cleanup to the ml collective component
- Added new Java methods to provide full MPI coverage
- Many OSHMEM cleanups
- Prevent comm_spawn from automatically launching a VM across
  all available nodes
- Close many memory leaks to achieve valgrind-clean operation
- Better handling of TCP connection discovery for mismatched networks
  where we don't have a direct 1:1 subnet match between nodes
- Prevent segfault when OMPI info tools are used in pipes and user
  exits one step of that pipe before completing output


- Fix for critical bug: mpirun removed files (but not directories)
  from / when run as root.  Thanks to Jay Fenlason and Orion Poplawski
  for bringing the issue to our attention and helping identify the


- Commit upstream ROMIO fix for mixed NFS+local filesystem environments.
- Several fixes for MPI-3 one-sided support.  For example,
  arbitrary-length datatypes are now supported.
- Add config support for the Mellanox ConnectX 4 card.
- Add missing MPI_COMM_GET|SET_INFO functions, and missing
  MPI_WEIGHTS_EMPTY and MPI_ERR_RMA_SHARED constants.  Thanks to
  Lisandro Dalcin for pointing out the issue.
- Update some help messages in OSHMEM, the usnic BTL, the TCP BTL, and
  ORTE, and update documentation about ompi_info's --level option.
- Fix some compiler warnings.
- Ensure that ORTE daemons are not bound to a single processor
  if TaskAffinity is set on by default in Slurm. Thanks to Artem Polyakov
  for identifying the problem and providing a patch


 *  Open MPI is now fully MPI-3.0 compliant
- Add Linux OpenSHMEM support built on top of Open MPI's MPI
  layer. Thanks to Mellanox for contributing this new feature.
- Allow restricting ORTE daemons to specific cores using the
  orte_daemon_cores MCA param.
- Ensure to properly set "locality" flags for processes launched via
  MPI dynamic functions such as MPI_COMM_SPAWN.
- Fix MPI_GRAPH_CREATE when nnodes is smaller than the size of the old
- usnic BTL now supports underlying UDP transport.
- usnic BTL now checks for common connectivty errors at first send to
  a remote server.
- Minor scalability improvements in the usnic BTL.
- ompi_info now lists whether the Java MPI bindings are available or not.
- MPI-3: mpi.h and the Fortran interfaces now report MPI_VERSION==3
- MPI-3: Added support for new RMA functions and functionality.
- Fix MPI_Info "const buglet.  Thanks to Orion Poplawski for
  identifying the issue.
- Multiple fixes to mapping/binding options. Thanks to Tetsuya Mishima
  for his assistance.
- Multiple fixes for normal and abnormal process termination,
  including singleton MPI_Abort and ensuring to kill entire process
  groups when abnormally terminating a job.
- Fix DESTDIR install for javadocs.  Thanks to Orion Poplawski for
  pointing out the issue.
- Various performance improvements for the MPI Java bindings.
- OMPI now uses its own internal random number generator and will not
  perturb srand() and friends.
- Some cleanups for Cygwin builds.  Thanks to Marco Atzeri for the
- Add a new collective component (coll/ml) that provides substantially
  improved performance.  It is still experimental, and requires
  setting coll_ml_priority > 0 to become active.
- Add version check during startup to ensure you are using the same
  version of Open MPI on all nodes in a job.
- Significantly improved the performance of MPI_DIMS_CREATE for large
  values.  Thanks to Andreas Scher for the contribution.
- Removed ASYNCHRONOUS keyword from the "ignore TKR" mpi_f08 module.
- Deprecated the following mpirun options:
  --bynode, --bycore, --byslot: replaced with --map-by node|core|slot.
  --npernode, --npersocket: replaced with --map-by ppr:N:node and
       --map-by ppr:N:socket, respectively
- Pick NFS "infinitely stale" fix from ROMIO upstream.
- Various PMI2 fixes and extension to support broader range of mappings.
- Improve launch performance at large scale.
- Add support for PBS/Torque environments that set environment
  variables to indicate the number of slots available on each nodes.
  Set the ras_tm_smp MCA parameter to "1" to enable this mode.
- Add new, more scalable endpoint exchange (commonly called "modex")
  method that only exchanges endpoint data on a per-peer basis
  on first message. Not all transports have been updated to use
  this feature. Set the rte_orte_direct_modex parameter to "1"
  to enable this mode.


 * As of release 1.7.4, OpenMPI's default mapping, ranking, and binding
 * settings have changed:
 * Mapping:
 *   if #procs <= 2, default to map-by core
 *   if #procs > 2, default to map-by socket
 * Ranking:
 *   if default mapping is used, then default to rank-by slot
 *   if map-by <obj> is given, then default to rank-by <obj>,
 *      where <obj> is whatever object we mapped against
 * Binding:
 *   default to bind-to core
 * Users can override any of these settings individually using the
 * corresponding MCA parameter. Note that multi-threaded applications
 * in particular may want to override at least the binding default
 * to allow threads to use multiple cores.
- Restore version number output in "ompi_info --all".
- Various bug fixes for the mpi_f08 Fortran bindings.
- Fix ROMIO compile error with Lustre 2.4.  Thanks to Adam Moody for
  reporting the issue.
- Various fixes for 32 bit platforms.
- Add ability to selectively disable building the mpi or mpi_f08
  module.  See the README file for details.
- Fix MX MTL finalization issue.
- Fix ROMIO issue when opening a file with MPI_MODE_EXCL.
- Fix PowerPC and MIPS assembly issues.
- Various fixes to the hcoll and FCA collective offload modules.
- Prevent integer overflow when creating datatypes.  Thanks to
  original patch from Gilles Gouaillardet.
- Port some upstream hwloc fixes to Open MPI's embedded copy for
  working around buggy NUMA node cpusets and including mising header
  files.  Thanks to Jeff Becker and Paul Hargrove for reporting the
- Fix recursive invocation issues in the MXM MTL.
- Various bug fixes to the new MCA parameter back-end system.
- Have the posix fbtl module link against -laio on NetBSD platforms.
  Thanks to Paul Hargrove for noticing the issue.
- Various updates and fixes to network filesystem detection to support
  more operating systems.
- Add gfortran v4.9 "ignore TKR" syntax to the mpi Fortran module.
- Various compiler fixes for several BSD-based platforms.  Thanks to
  Paul Hargrove for reporting the issues.
- Fix when MPI_COMM_SPAWN[_MULTIPLE] is used on oversubscribed
- Change the output from --report bindings to simply state that a
  process is not bound, instead of reporting that it is bound to all
- Per MPI-3.0 guidance, remove support for all MPI subroutines with
  choice buffers from the TKR-based mpi Fortran module.  Thanks to Jed
  Brown for raising the issue.
- Only allow the usnic BTL to build on 64 bit platforms.
- Various bug fixes to SLURM support, to include ensuring proper
  exiting on abnormal termination.
- Ensure that MPI_COMM_SPAWN[_MULTIPLE] jobs get the same mapping
  directives that were used with mpirun.
- Fixed the application of TCP_NODELAY.
- Change the TCP BTL to not warn if a non-existent interface is
- Restored the "--bycore" mpirun option for backwards compatibility.
- Fixed debugger attach functionality.  Thanks to Ashley Pittman for
  reporting the issue and suggesting the fix.
- Fixed faulty MPI_IBCAST when invoked on a communicator with only
  one process.
- Add new Mellanox device IDs to the openib BTL.
- Progress towards cleaning up various internal memory leaks as
  reported by Valgrind.
- Fixed some annoying flex-generated warnings that have been there for
  years.  Thanks to Tom Fogal for the initial patch.
- Support user-provided environment variables via the "env" info key
  to MPI_COMM_SPAWN[_MULTIPLE].  Thanks to Tom Fogal for the feature
- Fix uninitialized variable in MPI_DIST_GRAPH_CREATE.
- Fix a variety of memory errors on SPARC platforms.  Thanks to
  Siegmar Gross for reporting and testing all the issues.
- Remove Solaris threads support.  When building on Solaris, pthreads
  will be used.
- Correctly handle the convertor internal stack for persistent
  receives.  Thanks to Guillaume Gouaillardet for identifying the
- Add support for using an external libevent via --with-libevent.  See
  the README for more details.
- Various OMPIO updates and fixes.
- Add support for the MPIEXEC_TIMEOUT environment variable.  If set,
  mpirun will terminate the job after this many seconds.
- Update the internal copy of ROMIO to that which shipped in MPICH
- Various performance tweaks and improvements in the usnic BTL,
  including now reporting MPI_T performance variables for each usnic
- Fix to not access send datatypes for non-root processes with
  MPI_ISCATTER[V] and MPI_IGATHER[V].  Thanks to Pierre Jolivet for
  supplying the initial patch.
- Update VampirTrace to
- Fix ptmalloc2 hook disable when used with ummunotify.
- Change the default connection manager for the openib BTL to be based
  on UD verbs data exchanges instead of ORTE OOB data exchanges.
- Fix Fortran compile error when compiling with 8-byte INTEGERs and
  4-byte ints.
- Fix C++11 issue identified by Jeremiah Willcock.
- Many changes, updates, and bug fixes to the ORTE run-time layer.
- Correctly handle MPI_REDUCE_SCATTER with recvcounts of 0.
- Update man pages for MPI-3, and add some missing man pages for
  MPI-2.x functions.
- Updated mpi_f08 module in accordance with post-MPI-3.0 errata which
  basically removed BIND(C) from all interfaces.
- Fixed MPI_IN_PLACE detection for MPI_SCATTER[V] in Fortran
  routines.  Thanks to Charles Gerlach for identifying the issue.
- Added support for routable RoCE to the openib BTL.
- Update embedded hwloc to v1.7.2.
- ErrMgr framework redesigned to better support fault tolerance development
  activities. See the following RFC for details:
- Added database framework to OPAL and changed all modex operations
  to flow thru it, also included additional system info in the
  available data
- Added staged state machine to support sequential work flows
- Added distributed file system support for accessing files across
  nodes that do not have networked file systems
- Extended filem framework to support scalable pre-positioning of
  files for use by applications, adding new "raw" component that
  transmits files across the daemon network
- Native Windows support has been removed. A cygwin package is
  available from that group for Windows-based use.
- Added new MPI Java bindings.  See the Javadocs for more details on
  the API.
- Wrapper compilers now add rpath support by default to generated
  executables on systems that support it.  This behavior can be
  disabled via --disable-wrapper-rpath.  See note in README about ABI
  issues when using rpath in MPI applications.
- Added a new parallel I/O component and multiple new frameworks to
  support parallel I/O operations.
- Fixed MPI_STATUS_SIZE Fortran issue when used with 8-byte Fortran
  INTEGERs and 4-byte C ints.  Since this issue affects ABI, it is
  only enabled if Open MPI is configured with
  --enable-abi-breaking-fortran-status-i8-fix.  Thanks to Jim Parker
  for supplying the initial patch.
- Add support for Intel Phi SCIF transport.
- For CUDA-aware MPI configured with CUDA 6.0, use new pointer
  attribute to avoid extra synchronization in stream 0 when using
  CUDA IPC between GPUs on the same node.
- For CUDA-aware MPI configured with CUDA 6.0, compile in support
  of GPU Direct RDMA in openib BTL to improve small message latency.
- Updated ROMIO from MPICH v3.0.4.
- MPI-3: Added support for remaining non-blocking collectives.
- MPI-3: Added support for neighborhood collectives.
- MPI-3: Updated C bindings with consistent use of [].
- MPI-3: Added the const keyword to read-only buffers.
- MPI-3: Added support for non-blocking communicator duplication.
- MPI-3: Added support for non-collective communicator creation.


- Make CUDA-aware support dynamically load so CUDA-aware
  MPI library can run on systems without CUDA software.
- Fix various issues with dynamic processes and intercommunicator
  operations under Torque.  Thanks to Suraj Prabhakaran for reporting
  the problem.
- Enable support for the Mellanox MXM2 library by default.
- Improve support for Portals 4.
- Various Solaris fixes.  Many thanks to Siegmar Gross for his
  incredible patience in reporting all the issues.
- MPI-2.2: Add reduction support for MPI_C_*COMPLEX and MPI::*COMPLEX.
- Fixed internal accounting when openpty() fails.  Thanks to Michal
  Peclo for reporting the issue and providing a patch.
- Fixed too-large memory consumption in XRC mode of the openib BTL.
  Thanks to Alexey Ryzhikh for the patch.
- Add bozo check for negative np values to mpirun to prevent a
  deadlock.  Thanks to Upinder Malhi for identifying the issue.
- Fixed MPI_IS_THREAD_MAIN behavior.  Thanks to Lisandro Dalcin for
  pointing out the problem.
- Various rankfile fixes.
- Fix functionality over iWARP devices.
- Various memory and performance optimizations and tweaks.
- Fix MPI_Cancel issue identified by Fujitsu.
- Add missing support for MPI_Get_address in the "use mpi" TKR
  implementation.  Thanks to Hugo Gagnon for identifying the issue.
- MPI-3: Add support for MPI_Count.
- MPI-2.2: Add missing MPI_IN_PLACE support for MPI_ALLTOALL.
- Added new usnic BTL to support the Cisco usNIC device.
- Minor VampirTrace update to
- Removed support for ancient OS X systems (i.e., prior to 10.5).
- Fixed obscure packing/unpacking datatype bug.  Thanks to Takahiro
  Kawashima for identifying the issue.
- Add run-time support for PMI2 environments.
- Update openib BTL default parameters to include support for Mellanox
  ConnectX3-Pro devices.
- Update libevent to v2.0.21.
- "ompi_info --param TYPE PLUGIN" now only shows a small number of MCA
  parameters by default.  Add "--level 9" or "--all" to see *all* MCA
  parameters.  See README for more details.
- Add support for asynchronous CUDA-aware copies.
- Add support for Mellanox MPI collective operation offload via the
  "hcoll" library.
- MPI-3: Add support for the MPI_T interface.  Open MPI's MCA
  parameters are now accessible via the MPI_T control variable
  interface.  Support has been added for a small number of MPI_T
  performance variables.
- Add Gentoo memory hooks override.  Thanks to Justin Bronder for the
- Added new "mindist" process mapper, allowing placement of processes
  via PCI locality information reported by the BIOS.
- MPI-2.2: Add support for MPI_Dist_graph functionality.
- Enable generic, client-side support for PMI2 implementations. Can
  be leveraged by any resource manager that implements PMI2; e.g. SLURM,
  versions 2.6 and higher.


- Major VampirTrace update to
  (** also appeared: 1.6.5)
- Fix to set flag==1 when MPI_IPROBE is called with MPI_PROC_NULL.
  (** also appeared: 1.6.5)
- Set the Intel Phi device to be ignored by default by the openib BTL.
  (** also appeared: 1.6.5)
- Decrease the internal memory storage used by intrinsic MPI datatypes
  for Fortran types.  Thanks to Takahiro Kawashima for the initial
  (** also appeared: 1.6.5)
- Fix total registered memory calculation for Mellanox ConnectIB and
  OFED 2.0.
  (** also appeared: 1.6.5)
- Fix possible data corruption in the MXM MTL component.
  (** also appeared: 1.6.5)
- Remove extraneous -L from hwloc's embedding.  Thanks to Stefan
  Friedel for reporting the issue.
  (** also appeared: 1.6.5)
- Fix contiguous datatype memory check.  Thanks to Eric Chamberland
  for reporting the issue.
  (** also appeared: 1.6.5)
- Make the openib BTL more friendly to ignoring verbs devices that are
  not RC-capable.
  (** also appeared: 1.6.5)
- Fix some MPI datatype engine issues.  Thanks to Thomas Jahns for
  reporting the issue.
  (** also appeared: 1.6.5)
- Add INI information for Chelsio T5 device.
  (** also appeared: 1.6.5)
- Integrate MXM STREAM support for MPI_ISEND and MPI_IRECV, and other
  minor MXM fixes.
  (** also appeared: 1.6.5)
- Fix to not show amorphous "MPI was already finalized" error when
  failing to MPI_File_close an open file.  Thanks to Brian Smith for
  reporting the issue.
  (** also appeared: 1.6.5)
- Add a distance-based mapping component to find the socket "closest"
  to the PCI bus.
- Fix an error that caused epoll to automatically be disabled
  in libevent.
- Upgrade hwloc to 1.5.2.
- *Really* fixed XRC compile issue in Open Fabrics support.
- Fix MXM connection establishment flow.
- Fixed parallel debugger ability to attach to MPI jobs.
- Fixed some minor memory leaks.
- Fixed datatype corruption issue when combining datatypes of specific
- Added Location Aware Mapping Algorithm (LAMA) mapping component.
- Fixes for MPI_STATUS handling in corner cases.
- Add a distance-based mapping component to find the socket "closest" to the PCI bus.


- Fixed compile error when --without-memory-manager was specified
  on Linux
- Fixed XRC compile issue in Open Fabrics support.


- Added MPI-3 functionality:
    - Matched probe
    - Non-blocking collectives
    - MPI_INFO_ENV support
    - Fortran '08 bindings (see below)
- Dropped support for checkpoint/restart due to loss of maintainer :-(
- Enabled compile-time warning of deprecated MPI functions by default
  (in supported compilers).
- Revamped Fortran MPI bindings (see the README for details):
  - "mpifort" is now the preferred wrapper compiler for Fortran
  - Added "use mpi_f08" bindings (for compilers that support it)
  - Added better "use mpi" support (for compilers that support it)
  - Removed incorrect MPI_SCATTERV interface from "mpi" module that
    was added in the 1.5.x series for ABI reasons.
- Lots of VampirTrace upgrades and fixes; upgrade to v5.14.3.
- Modified process affinity system to provide warning when bindings
  result in being "bound to all", which is equivalent to not being
- Removed maffinity, paffinity, and carto frameworks (and associated
  MCA params).
- Upgraded to hwloc v1.5.1.
- Added performance improvements to the OpenIB (OpenFabrics) BTL.
- Made malloc hooks more friendly to IO interprosers.  Thanks to the
  bug report and suggested fix from Darshan maintainer Phil Carns.
- Added support for the DMTCP checkpoint/restart system.
- Added support for the Cray uGNI interconnect.
- Fixed header file problems on OpenBSD.
- Fixed issue with MPI_TYPE_CREATE_F90_REAL.
- Wrapper compilers now explicitly list/link all Open MPI libraries if
  they detect static linking CLI arguments.
- Open MPI now requires a C99 compiler to build.  Please upgrade your
  C compiler if you do not have a C99-compliant compiler.
- Fix MPI_GET_PROCESSOR_NAME Fortran binding to set ierr properly.
  Thanks to LANL for spotting the error.
- Many MXM and FCA updates.
- Fixed erroneous free of putenv'ed string that showed up in Valgrind
- Fixed a bug that prevented MCA params from being forwarded to
  daemons upon launch.
- Fixed issues with VT and CUDA --with-cuda[-libdir] configuration CLI
- Entirely new implementation of many MPI collective routines focused
  on better performance.
- Revamped autogen / build system.
- Add new sensor framework to ORTE that includes modules for detecting
  stalled applications and processes that consume too much memory.
- Added new state machine framework to ORTE that converts ORTE into an
  event-driven state machine using the event library.
- Added a new MCA parameter (ess_base_stream_buffering) that allows the user
  to override the system default for buffering of stdout/stderr streams
  (via setvbuf). Parameter is not visible via ompi_info.
- Revamped the launch system to allow consideration of node hardware
  in assigning process locations and bindings.
- Added the -novm option to preserve the prior launch behavior.
- Revamped the process mapping system to utilize node hardware by adding
  new map-by, rank-by, and bind-to cmd line options.
- Added new MCA parameter to provide protection against IO forwarding
- Dropped support for native Windows due to loss of maintainers. :-(
- Added a new parallel I/O component and multiple new frameworks to
  support parallel I/O operations.
- Fix typo in orte_setup_hadoop.m4. Thanks to Aleksej Saushev for
  reporting it
- Fix a very old error in opal_path_access(). Thanks to Marco Atzeri
  for chasing it down.


- Updated default SRQ parameters for the openib BTL.
  (** also to appear: 1.7.2)
- Major VampirTrace update to
  (** also to appear: 1.7.2)
- Fix to set flag==1 when MPI_IPROBE is called with MPI_PROC_NULL.
  (** also to appear: 1.7.2)
- Set the Intel Phi device to be ignored by default by the openib BTL.
  (** also to appear: 1.7.2)
- Decrease the internal memory storage used by intrinsic MPI datatypes
  for Fortran types.  Thanks to Takahiro Kawashima for the initial
  (** also to appear: 1.7.2)
- Fix total registered memory calculation for Mellanox ConnectIB and
  OFED 2.0.
  (** also to appear: 1.7.2)
- Fix possible data corruption in the MXM MTL component.
  (** also to appear: 1.7.2)
- Remove extraneous -L from hwloc's embedding.  Thanks to Stefan
  Friedel for reporting the issue.
  (** also to appear: 1.7.2)
- Fix contiguous datatype memory check.  Thanks to Eric Chamberland
  for reporting the issue.
  (** also to appear: 1.7.2)
- Make the openib BTL more friendly to ignoring verbs devices that are
  not RC-capable.
  (** also to appear: 1.7.2)
- Fix some MPI datatype engine issues.  Thanks to Thomas Jahns for
  reporting the issue.
  (** also to appear: 1.7.2)
- Add INI information for Chelsio T5 device.
  (** also to appear: 1.7.2)
- Integrate MXM STREAM support for MPI_ISEND and MPI_IRECV, and other
  minor MXM fixes.
  (** also to appear: 1.7.2)
- Improved alignment for OpenFabrics buffers.
- Fix to not show amorphous "MPI was already finalized" error when
  failing to MPI_File_close an open file.  Thanks to Brian Smith for
  reporting the issue.
  (** also to appear: 1.7.2)

Revision 1.13 / (download) - annotate - [select for diffs], Thu Jan 15 20:51:11 2015 UTC (8 years, 10 months ago) by dholland
Branch: MAIN
CVS Tags: pkgsrc-2015Q3-base, pkgsrc-2015Q3, pkgsrc-2015Q2-base, pkgsrc-2015Q2, pkgsrc-2015Q1-base, pkgsrc-2015Q1
Changes since 1.12: +14 -1 lines
Diff to previous 1.12 (colored)

Fold PLIST.Linux into PLIST using more plist vars, and add more files
reported in PR 49080. I did look in the package configury to figure
out which ones were mutually connected, but I may have gotten it
wrong as there's a monumental maze of m4 autotoolery.

Revision 1.12 / (download) - annotate - [select for diffs], Thu Jan 15 20:26:47 2015 UTC (8 years, 10 months ago) by dholland
Branch: MAIN
Changes since 1.11: +7 -1 lines
Diff to previous 1.11 (colored)

Apply jperkin@'s patch for PR 49080, which changes it to use plist vars
for options instead of separate tiny plist files. This also allows
PLIST.Linux to be recognized.

Revision 1.11 / (download) - annotate - [select for diffs], Sun Feb 24 01:22:36 2013 UTC (10 years, 9 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2014Q4-base, pkgsrc-2014Q4, pkgsrc-2014Q3-base, pkgsrc-2014Q3, pkgsrc-2014Q2-base, pkgsrc-2014Q2, pkgsrc-2014Q1-base, pkgsrc-2014Q1, pkgsrc-2013Q4-base, pkgsrc-2013Q4, pkgsrc-2013Q3-base, pkgsrc-2013Q3, pkgsrc-2013Q2-base, pkgsrc-2013Q2, pkgsrc-2013Q1-base, pkgsrc-2013Q1
Changes since 1.10: +1 -0 lines
Diff to previous 1.10 (colored)

Update to OpenMPI 1.6.4

Here is a list of changes in v1.6.4 as compared to v1.6.3:

- Fix Cygwin shared memory and debugger plugin support.  Thanks to
  Marco Atzeri for reporting the issue and providing initial patches.
- Fix to obtaining the correct available nodes when a rankfile is
  providing the allocation.  Thanks to Siegmar Gross for reporting the
- Fix process binding issue on Solaris.  Thanks to Siegmar Gross for
  reporting the problem.
- Updates for MXM 2.0.
- Major VT update to
- Fixed F77 constants for Cygwin/Cmake build.
- Fix a linker error when configuring --without-hwloc.
- Automatically provide compiler flags that compile properly on some
  types of ARM systems.
- Fix slot_list behavior when multiple sockets are specified.  Thanks
  to Siegmar Gross for reporting the problem.
- Fixed memory leak in one-sided operations.  Thanks to Victor
  Vysotskiy for letting us know about this one.
- Added performance improvements to the OpenIB (OpenFabrics) BTL.
- Improved error message when process affinity fails.
- Fixed MPI_MINLOC on man pages for MPI_REDUCE(_LOCAL).  Thanks to Jed
  Brown for noticing the problem and supplying a fix.
- Made malloc hooks more friendly to IO interprosers.  Thanks to the
  bug report and suggested fix from Darshan maintainer Phil Carns.
- Restored ability to direct launch under SLURM without PMI support.
- Fixed MPI datatype issues on OpenBSD.
- Major VT update to
- Support FCA v3.0+.
- Fixed header file problems on OpenBSD.
- Fixed issue with MPI_TYPE_CREATE_F90_REAL.
- Fix an issue with using external libltdl installations.  Thanks to
  opolawski for identifying the problem.
- Fixed MPI_IN_PLACE case for MPI_ALLGATHER for FCA.
- Allow SLURM PMI support to look in lib64 directories.  Thanks to
  Guillaume Papaure for the patch.
- Restore "use mpi" ABI compatibility with the rest of the 1.5/1.6
  series (except for v1.6.3, where it was accidentally broken).
- Fix a very old error in opal_path_access(). Thanks to Marco Atzeri
  for chasing it down.

Revision 1.10 / (download) - annotate - [select for diffs], Wed Oct 17 23:27:34 2012 UTC (11 years, 1 month ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2012Q4-base, pkgsrc-2012Q4
Changes since 1.9: +0 -5 lines
Diff to previous 1.9 (colored)

Update to OpenMPI 1.6.2
Don't build VampirTrace anymore, it will be introduced as separate package.

Changes in v1.6.2 as compared to v1.6.1:

- Fix issue with MX MTL. Thanks to Doug Eadline for raising the issue.
- Fix singleton MPI_COMM_SPAWN when the result job spans multiple nodes.
- Fix MXM hang, and update for latest version of MXM.
- Update to support Mellanox FCA 2.5.
- Fix startup hang for large jobs.
- Ensure MPI_TESTANY / MPI_WAITANY properly set the empty status when
- Fix MPI_CART_SUB behavior of not copying periods to the new
  communicator properly. Thanks to John Craske for the bug report.
- Add btl_openib_abort_not_enough_reg_mem MCA parameter to cause Open
  MPI to abort MPI jobs if there is not enough registered memory
  available on the system (vs. just printing a warning). Thanks to
  Brock Palen for raising the issue.
- Minor fix to Fortran MPI_INFO_GET: only copy a value back to the
  user's buffer if the flag is .TRUE.
- Fix VampirTrace compilation issue with the PGI compiler suite.

Revision 1.9 / (download) - annotate - [select for diffs], Tue Jun 12 23:36:31 2012 UTC (11 years, 5 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2012Q3-base, pkgsrc-2012Q3, pkgsrc-2012Q2-base, pkgsrc-2012Q2
Changes since 1.8: +0 -8 lines
Diff to previous 1.8 (colored)

Update to OpenMPI 1.6

Disable automatic detection of SGE and SLURM to avoid PLIST divergence.

Changes in OpenMPI 1.6

v1.6 is a major release; it effectively deprecates both the v1.4.x
and v1.5.x series, and replaces v1.4.x as the current "super stable" series.
A forthcoming v1.7 series will become the new "feature" series.

*All users* -- including production users and downstream providers --
are encouraged to upgrade to v1.6.

Note that v1.6 is ABI compatible with the entire v1.5.x series,
but is not ABI compatible with the v1.4.x series.
See for a description
of Open MPI's release methodology.

Here is a list of changes in v1.6 as compared to v1.5.5:

- Fix some process affinity issues.  When binding a process, Open MPI
  will now bind to all available hyperthreads in a core (or socket,
  depending on the binding options specified).
  --> Note that "mpirun --bind-to-socket ..." does not work on POWER6-
      and POWER7-based systems with some Linux kernel versions.  See
      the FAQ on the Open MPI web site for more information.
- Add support for ARM5 and ARM6 (in addition to the existing ARM7
  support).  Thanks to Evan Clinton for the patch.
- Minor Mellanox MXM fixes.
- Properly detect FDR10, FDR, and EDR OpenFabrics devices.
- Minor fixes to the mpirun(1) and MPI_Comm_create(3) man pages.
- Prevent segv if COMM_SPAWN_MULTIPLE fails.  Thanks to Fujitsu for
  the patch.
- Disable interposed memory management in fakeroot environments.  This
  fixes a problem in some build environments.
- Minor hwloc updates.
- Array versions of MPI_TEST and MPI_WAIT with a count==0 will now
  return immediately with MPI_SUCCESS.  Thanks to Jeremiah Willcock
  for the suggestion.
- Update VampirTrace to v5.12.2.
- Properly handle forwarding stdin to all processes when "mpirun
  --stdin all" is used.
- Workaround XLC assembly bug.
- OS X Tiger (10.3) has not been supported for a while, so forcibly
  abort configure if we detect it.
- Fix segv in the openib BTL when running on SPARC 64 systems.
- Fix some include file ordering issues on some BSD-based platforms.
  Thanks to Paul Hargove for this (and many, many other) fixes.
- Properly handle .FALSE. return parameter value to attribute copy
  callback functions.
- Fix a bunch of minor C++ API issues; thanks to Fujitsu for the patch.
- Fixed the default hostfile MCA parameter behavior.
- Per the MPI spec, ensure not to touch the port_name parameter to
  MPI_CLOSE_PORT (it's an IN parameter).

Revision 1.8 / (download) - annotate - [select for diffs], Mon May 28 18:38:17 2012 UTC (11 years, 6 months ago) by asau
Branch: MAIN
Changes since 1.7: +14 -4 lines
Diff to previous 1.7 (colored)

Update to OpenMPI 1.5.5

Changes in 1.5.5

- Many, many portability configure/build fixes courtesy of Paul
  Hargrove.  Thanks, Paul!
- Fixed shared memory fault tolerance support compiler errors.
- Removed not-production-quality rshd and tmd PLM launchers.
- Minor updates to the Open MPI SRPM spec file.
- Fixed mpirun's --bind-to-socket option.
- A few MPI_THREAD_MULTIPLE fixes in the shared memory BTL.
- Upgrade the GNU Autotools used to bootstrap the 1.5/1.6 series to
  all the latest versions at the time of this release.
- Categorically state in the README that if you're having a problem
  with Open MPI with the Linux Intel 12.1 compilers, *upgrade your
  Intel Compiler Suite to the latest patch version*, and the problems
  will go away. :-)
- Fix the --without-memory-manager configure option.
- Fixes for Totalview/DDT MPI-capable debuggers.
- Update rsh/ssh support to properly handle the Mac OS X library path
- Make warning about shared memory backing files on a networked file
  system be optional (i.e., can be disabled via MCA parameter).
- Several fixes to processor and memory affinity.
- Various shared memory infrastructure improvements.
- Various checkpoint/restart fixes.
- Fix MPI_IN_PLACE (and other MPI sentinel values) on OS X.  Thanks to
  Dave Goodell for providing the magic OS X gcc linker flags necessary.
- Various man page corrections and typo fixes.  Thanks to Fujitsu for
  the patch.
- Updated wrapper compiler man pages to list the various --showme
  options that are available.
- Add PMI direct-launch support (e.g., "srun mpi_application" under
- Correctly compute the aligned address when packing the
  datatype description. Thanks to Fujitsu for the patch.
- Fix MPI obscure corner case handling in packing MPI datatypes.
  Thanks to Fujitsu for providing the patch.
- Workaround an Intel compiler v12.1.0 2011.6.233 vector optimization
- Output the MPI API in ompi_info output.
- Major VT update to
- Rankfile 'P'hysical mapping is no longer available.
- Upgrade embedded Hardware Locality (hwloc) v1.3.2, plus some
  post-1.3.2-release bug fixes.  All processor and memory binding is
  now done through hwloc.  Woo hoo!  Note that this fixes core binding
  on AMD Opteron 6200 and 4200 series-based systems (sometimes known
  as Interlagos, Valencia, or other Bulldozer-based chips).
- New MCA parameters to control process-wide memory binding policy:
  hwloc_base_mem_alloc_policy, hwloc_base_mem_bind_failure_action (see
  ompi_info --param hwloc base).
- Removed direct support for libnuma.  Libnuma support may now be
  picked up through hwloc.
- Added MPI_IN_PLACE support to MPI_EXSCAN.
- Various fixes for building on Windows, including MinGW support.
- Removed support for the OpenFabrics IBCM connection manager.
- Updated Chelsio T4 and Intel NE OpenFabrics default buffer settings.
- Increased the default RDMA CM timeout to 30 seconds.
- Issue a warning if both btl_tcp_if_include and btl_tcp_if_exclude
  are specified.
- Many fixes to the Mellanox MXM transport.

Revision 1.7 / (download) - annotate - [select for diffs], Sat Aug 27 19:32:55 2011 UTC (12 years, 3 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2012Q1-base, pkgsrc-2012Q1, pkgsrc-2011Q4-base, pkgsrc-2011Q4, pkgsrc-2011Q3-base, pkgsrc-2011Q3
Changes since 1.6: +2 -1 lines
Diff to previous 1.6 (colored)

Update to OpenMPI 1.5.4

Changes in v1.5.4 as compared to v1.5.3:

- Add support for the (as yet unreleased) Mellanox MXM transport.
- Add support for dynamic service levels (SLs) in the openib BTL.
- Fixed C++ bindings cosmetic/warnings issue with
  MPI::Comm::NULL_COPY_FN and MPI::Comm::NULL_DELETE_FN.  Thanks to
  Julio Hoffimann for identifying the issues.
- Also allow the word "slots" in rankfiles (i.e., not just "slot").
  (** also to appear in 1.4.4)
- Add Mellanox ConnectX 3 device IDs to the openib BTL defaults.
  (** also to appear in 1.4.4)
- Various FCA updates.
- Fix 32 bit SIGBUS errors on Solaris SPARC platforms.
- Add missing ARM assembly code files.
- Update to allow more than 128 entries in an appfile.
  (** also to appear in 1.4.4)
- Various VT updates and bug fixes.
- Update description of btl_openib_cq_size to be more accurate.
  (** also to appear in 1.4.4)
- Various assembly "clobber" fixes.
- Fix a hang in carto selection in obscure situations.
- Guard the inclusion of execinfo.h since not all platforms have it.  Thanks
  to Aleksej Saushev for identifying this issue.
  (** also to appear in 1.4.4)
- Support Solaris legacy munmap prototype changes.
  (** also to appear in 1.4.4)
- Updated to Automake 1.11.1 per
- Fix compilation of LSF support.
- Update MPI_Comm_spawn_multiple.3 man page to reflect what it
  actually does.
- Fix for possible corruption of the environment.  Thanks to Peter
  Thompson for the suggestion.  (** also to appear in 1.4.4)
- Enable use of PSM on direct-launch SLURM jobs.
- Update paffinity hwloc to v1.2, and to fix minor bugs affinity
  assignment bugs on PPC64/Linux platforms.
- Let the openib BTL auto-detect its bandwidth.
- Support new MPI-2.2 datatypes.
- Updates to support more datatypes in MPI one-sided communication.
- Fix recursive locking bug when MPI-IO was used with
  MPI_THREAD_MULTIPLE.  (** also to appear in 1.4.4)
- Fix mpirun handling of prefix conflicts.
- Ensure mpirun's --xterm options leaves sessions attached.
  (** also to appear in 1.4.4)
- Fixed type of sendcounts and displs in the "use mpi" F90 module.
  ABI is preserved, but applications may well be broken.  See the
  README for more details.  Thanks to Stanislav Sazykin for
  identifying the issue.  (** also to appear in 1.4.4)
- Fix indexed datatype leaks.  Thanks to Pascal Deveze for supplying
  the initial patch.  (** also to appear in 1.4.4)
- Fix debugger mapping when mpirun's -npernode option is used.
- Fixed support for configure's --disable-dlopen option when used with
  "make distclean".
- Fix segv associated with MPI_Comm_create with MPI_GROUP_EMPTY.
  Thanks to Dominik Goeddeke for finding this.
  (** also to appear in 1.4.4)
- Improved LoadLeveler ORTE support.
- Add new WindVerbs BTL plugin, supporting native OpenFabrics verbs on
  Windows (the "wv" BTL).
- Add new btl_openib_gid_index MCA parameter to allow selecting which
  GID to use on an OpenFabrics device's GID table.
- Add support for PCI relaxed ordering in the OpenFabrics BTL (when
- Update rsh logic to allow correct SGE operation.
- Ensure that the mca_paffinity_alone MCA parameter only appears once
  in the ompi_info output.  Thanks to Gus Correa for identifying the
- Fixed return codes from MPI_PROBE and MPI_IPROBE.
  (** also to appear in 1.4.4)
- Remove --enable-progress-thread configure option; it doesn't work on
  the v1.5 branch.  Rename --enable-mpi-threads to
  --enable-mpi-thread-multiple.  Add new --enable-opal-multi-threads
- Updates for Intel Fortran compiler version 12.
- Remove bproc support.  Farewell bproc!
- If something goes wrong during MPI_INIT, fix the error
  message to say that it's illegal to invoke MPI_INIT before

Revision 1.6 / (download) - annotate - [select for diffs], Wed Mar 23 05:32:29 2011 UTC (12 years, 8 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2011Q2-base, pkgsrc-2011Q2, pkgsrc-2011Q1-base, pkgsrc-2011Q1
Changes since 1.5: +3 -2 lines
Diff to previous 1.5 (colored)

Update to OpenMPI 1.5.3:


- Add missing "affinity" MPI extension (i.e., the OMPI_Affinity_str()
  API) that was accidentally left out of the 1.5.2 release.


- Replaced all custom topology / affinity code with initial support
  for hwloc v1.1.1 (PLPA has been removed -- long live hwloc!).  Note
  that hwloc is bundled with Open MPI, but an external hwloc can be
  used, if desired.  See README for more details.
- Many CMake updates for Windows builds.
- Updated opal_cr_thread_sleep_wait MCA param default value to make it
  less aggressive.
- Updated debugger support to allow Totalview attaching from jobs
  launched directly via srun (not mpirun).  Thanks to Nikolay Piskun
  for the patch.
- Added more FTB/CIFTS support.
- Fixed compile error with the PGI compiler.
- Portability fixes to allow the openib BTL to run on the Solaris
  verbs stack.
- Fixed multi-token command-line issues when using the mpirun
  --debug switch.  For example:
      mpirun --debug -np 2 a.out "foo bar"
  Thanks to Gabriele Fatigati for reporting the issue.
- Added ARM support.
- Added the MPI_ROOT environment variable in the Open MPI Linux SRPM
  for customers who use the BPS and LSF batch managers.
- Updated ROMIO from MPICH v1.3.1 (plus one additional patch).
- Fixed some deprecated MPI API function notification messages.
- Added new "bfo" PML that provides failover on OpenFabrics networks.
- Fixed some buffer memcheck issues in MPI_*_init.
- Added Solaris-specific chip detection and performance improvements.
- Fix some compile errors on Solaris.
- Updated the "rmcast" framework with bug fixes, new functionality.
- Updated the Voltaire FCA component with bug fixes, new
  functionality.  Support for FCA version 2.1.
- Fix gcc 4.4.x and 4.5.x over-aggressive warning notifications on
  possibly freeing stack variables.  Thanks to the Gentoo packagers
  for reporting the issue.
- Make the openib component be verbose when it disqualifies itself due
- Minor man page fixes.
- Various checkpoint / restart fixes.
- Fix race condition in the one-sided unlock code.  Thanks to
  Guillaume Thouvenin for finding the issue.
- Improve help message aggregation.
- Add OMPI_Affinity_str() optional user-level API function (i.e., the
  "affinity" MPI extension).  See README for more details.
- Added btl_tcp_if_seq MCA parameter to select a different ethernet
  interface for each MPI process on a node.  This parameter is only
  useful when used with virtual ethernet interfaces on a single
  network card (e.g., when using virtual interfaces give dedicated
  hardware resources on the NIC to each process).
- Changed behavior of mpirun to terminate if it receives 10 (or more)
- Fixed oversubscription detection.
- Added new mtl_mx_board and mtl_mx_endpoint MCA parameters.
- Added ummunotify support for OpenFabrics-based transports.  See the
  README for more details.

Revision 1.5 / (download) - annotate - [select for diffs], Thu Dec 16 21:00:53 2010 UTC (12 years, 11 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2010Q4-base, pkgsrc-2010Q4
Changes since 1.4: +57 -25 lines
Diff to previous 1.4 (colored)

Update to OpenMPI 1.5.1

Changes in 1.5.1

- Fixes for the Oracle Studio 12.2 Fortran compiler.
- Fix SPARC and SPARCv9 atomics.  Thanks to Nicola Stange for the
  initial patch.
- Fix Libtool issues with the IBM XL compiler in 64-bit mode.
- Restore the reset of the libevent progress counter to avoid
  over-sampling the event library.
- Update memory barrier support.
- Use memmove (instead of memcpy) when necessary (e.g., source and
  destination overlap).
- Fixed ompi-top crash.
- Fix to handle Autoconf --program-transforms properly and other
  m4/configury updates.  Thanks to the GASNet project for the
  --program transforms fix.
- Allow hostfiles to specify usernames on a per-host basis.
- Update wrapper compiler scripts to search for perl during configure,
  per request from the BSD maintainers.
- Minor man page fixes.
- Added --with-libltdl option to allow building Open MPI with an
  external installation of libltdl.
- Fixed various issues with -D_FORTIFY_SOURCE=2.
- Various VT fixes and updates.

Notable changes in 1.5

- Added "knem" support: direct process-to-process copying for shared
  memory message passing.  See
  and the README file for more details.
- Updated shared library versioning scheme and linking style of MPI
  applications.  The MPI application ABI has been broken from the
  v1.3/v1.4 series.  MPI applications compiled against any prior
  version of Open MPI will need to, at a minimum, re-link.  See the
  README file for more details.
- Added "fca" collective component, enabling MPI collective offload
  support for Voltaire switches.
- Fixed MPI one-sided operations with large target displacements.
  Thanks to Brian Price and Jed Brown for reporting the issue.
- Fixed MPI_GET_COUNT when used with large counts.  Thanks to Jed
  Brown for reporting the issue.
- Made the openib BTL safer if extremely low SRQ settings are used.
- Fixed handling of the array_of_argv parameter in the Fortran
  binding of MPI_COMM_SPAWN_MULTIPLE (** also to appear: 1.4.3).
- Fixed malloc(0) warnings in some collectives.
- Fixed a problem with the Fortran binding for
  MPI_FILE_CREATE_ERRHANDLER.  Thanks to Secretan Yves for identifying
  the issue (** also to appear: 1.4.3).
- Updates to the LSF PLM to ensure that the path is correctly passed.
  Thanks to Teng Lin for the patch (** also to appear: 1.4.3).
  bindings.  Thanks to Paul Kapinos for pointing out the issue
  (** also to appear: 1.4.3).
- Fixed extra_state parameter types in F90 prototypes for
- Fixes for Solaris oversubscription detection.
- If the PML determines it can't reach a peer process, print a
  slightly more helpful message.  Thanks to Nick Edmonds for the
- Make btl_openib_if_include/exclude function the same way
  btl_tcp_if_include/exclude works (i.e., supplying an _include list
  overrides supplying an _exclude list).
- Apply more scalable reachability algorithm on platforms with more
  than 8 TCP interfaces.
- Various assembly code updates for more modern platforms / compilers.
- Relax restrictions on using certain kinds of MPI datatypes with
  one-sided operations.  Users beware; not all MPI datatypes are valid
  for use with one-sided operations!
- Improve behavior of MPI_COMM_SPAWN with regards to --bynode.
- Various threading fixes in the openib BTL and other core pieces of
  Open MPI.
- Various help file and man pages updates.
- Various FreeBSD and NetBSD updates and fixes.  Thanks to Kevin
  Buckley and Aleksej Saushev for their work.
- Fix case where freeing communicators in MPI_FINALIZE could cause
  process failures.
- Print warnings if shared memory state files are opened on what look
  like networked filesystems.
- Update libevent to v1.4.13.
- Allow propagating signals to processes that call fork().
- Fix bug where MPI_GATHER was sometimes incorrectly examining the
  datatype on non-root processes.  Thanks to Michael Hofmann for
  investigating the issue.
- Various Microsoft Windows fixes.
- Various Catamount fixes.
- Various checkpoint / restart fixes.
- Xgrid support has been removed until it can be fixed (patches
  would be welcome).
- Added simplistic "libompitrace" contrib package.  Using the MPI
  profiling interface, it essentially prints out to stderr when select
  MPI functions are invoked.
- Update bundled VampirTrace to v5.8.2.
- Add pkg-config(1) configuration files for ompi, ompi-c, ompi-cxx,
  ompi-f77, ompi-f90.  See the README for more details.
- Removed the libopenmpi_malloc library (added in the v1.3 series)
  since it is no longer necessary
- Add several notifier plugins (generally used when Open MPI detects
  system/network administrator-worthy problems); each have their own
  MCA parameters to govern their usage.  See "ompi_info --param
  notifier <name>" for more details.
  - command to execute arbitrary commands (e.g., run a script).
  - file to send output to a file.
  - ftb to send output to the Fault Tolerant Backplane (see
  - hnp to send the output to mpirun.
  - smtp (requires libesmtp) to send an email.

Revision 1.4 / (download) - annotate - [select for diffs], Wed Nov 24 01:56:13 2010 UTC (13 years ago) by asau
Branch: MAIN
Changes since 1.3: +1 -0 lines
Diff to previous 1.3 (colored)

Update to OpenMPI 1.4.3

New in 1.4.3

- Fixed handling of the array_of_argv parameter in the Fortran
- Fixed a problem with the Fortran binding for
  MPI_FILE_CREATE_ERRHANDLER.  Thanks to Secretan Yves for identifying
  the issue.
- Updates to the LSF PLM to ensure that the path is correctly passed.
  Thanks to Teng Lin for the patch.
  bindings.  Thanks to Paul Kapinos for pointing out the issue.
- Fixed various MPI_THREAD_MULTIPLE race conditions.
- Fixed an issue with an undeclared variable from ptmalloc2 munmap on
  BSD systems.
- Fixes for BSD interface detection.
- Various other BSD fixes.  Thanks to Kevin Buckley helping to track.
  all of this down.
- Fixed issues with the use of the -nper* mpirun command line arguments.
- Fixed an issue with coll tuned dynamic rules.
- Fixed an issue with the use of OPAL_DESTDIR being applied too aggressively.
- Fixed an issue with one-sided xfers when the displacement exceeds 2GBytes.
- Change to ensure TotalView works properly on Darwin.
- Added support for Visual Studio 2010.
- Fix to ensure proper placement of VampirTrace header files.
- Needed to add volatile keyword to a varialbe used in debugging
- Fixed a bug in inter-allgather.
- Fixed malloc(0) warnings.
- Corrected a typo the MPI_Comm_size man page (intra -> inter).  Thanks
  to Simon number.cruncher for pointing this out.
- Fixed a SegV in orted when given more than 127 app_contexts.
- Removed xgrid source code from the 1.4 branch since it is no longer
  supported in the 1.4 series.
- Removed the --enable-opal-progress-threads config option since
  opal progress thread support does not work in 1.4.x.
- Fixed a defect in VampirTrace's vtfilter.
- Fixed wrong Windows path in hnp_contact.
- Removed the requirement for a paffinity component.
- Removed a hardcoded limit of 64 interconnected jobs.
- Fix to allow singletons to use ompi-server for rendezvous.
- Fixed bug in output-filename option.
- Fix to correctly handle failures in mx_init().
- Fixed a potential Fortran memory leak.
- Fixed an incorrect branch in some ppc32 assembly code.  Thanks
  to Matthew Clark for this fix.
- Remove use of undocumented AS_VAR_GET macro during configuration.
- Fixed an issue with VampirTrace's wrapper for MPI_init_thread.
- Updated mca-btl-openib-device-params.ini file with various new vendor id's.
- Configuration fixes to ensure CPPFLAGS in handled properly if a non-standard
  valgrind location was specified.
- Various man page updates

Revision 1.3 / (download) - annotate - [select for diffs], Fri May 14 20:12:58 2010 UTC (13 years, 6 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2010Q3-base, pkgsrc-2010Q3, pkgsrc-2010Q2-base, pkgsrc-2010Q2
Changes since 1.2: +22 -1 lines
Diff to previous 1.2 (colored)

Update to OpenMPI 1.4.2

Changes in v1.4.2 as compared to v1.4.1:

- Fixed problem when running in heterogeneous environments.
- Update LSF support to ensure that the path is passed correctly.
- Fixed some miscellaneous oversubscription detection bugs.
- IBM re-licensed its LoadLeveler code to be BSD-compliant.
- Various fixes for multithreading deadlocks, race conditions, and
  other nefarious things.
- Fixed ROMIO's handling of "nearly" contiguous issues (e.g., with
  non-zero true_lb).
- Bunches of Windows build fixes.
- Now allow the graceful failover from MTLs to BTLs if no MTLs can
  initialize successfully.
- Added "clobber" information to various atomic operations, fixing
  erroneous behavior in some newer versions of the GNU compiler suite.
- Update various iWARP and InfiniBand device specifications in the
  OpenFabrics .ini support file.
- Fix the use of hostfiles when a username is supplied.
- Various fixes for rankfile support.
- Updated the internal version of VampirTrace to 5.4.12.
- Fixed OS X TCP wireup issues having to do with IPv4/IPv6 confusion
  (see for more
- Fixed some problems in processor affinity support, including when
  there are "holes" in the processor namespace (e.g., offline
- Ensure that Open MPI's "session directory" (usually located in /tmp)
  is cleaned up after process termination.
- Fixed some problems with the collective "hierarch" implementation
  that could occur in some obscure conditions.
- Various MPI_REQUEST_NULL, API parameter checking, and attribute
  error handling fixes.
- Fix case where MPI_GATHER erroneously used datatypes on non-root nodes.
- Patched ROMIO support for PVFS2 > v2.7 (patch taken from MPICH2
  version of ROMIO).
- Fixed "mpirun --report-bindings" behavior when used with
  mpi_paffinity_alone=1.  Also fixed mpi_paffinity_alone=1 behavior
  with non-MPI applications.
- Ensure that all OpenFabrics devices have compatible receive_queues
  specifications before allowing them to communicate.  See the lengthy
  comment in for details.
- Fix some issues with checkpoint/restart.
- Improve the pre-MPI_INIT/post-MPI_FINALIZE error messages.
- Ensure that loopback addresses are never advertised to peer
  processes for RDMA/OpenFabrics support.
- Fixed a CSUM PML false positive.
- Various fixes for Catamount support.
- Minor update to wrapper compilers in how user-specific argv is
  ordered on the final command line.  Thanks to Jed Brown for the

Revision 1.2 / (download) - annotate - [select for diffs], Tue Jan 19 00:45:58 2010 UTC (13 years, 10 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2010Q1-base, pkgsrc-2010Q1
Changes since 1.1: +2 -1 lines
Diff to previous 1.1 (colored)

Update to OpenMPI 1.4.1:

- Update to PLPA v1.3.2, addressing a licensing issue identified by
  the Fedora project.  See for details.
- Add check for malformed checkpoint metadata files (Ticket #2141).
- Fix error path in ompi-checkpoint when not able to checkpoint
  (Ticket #2138).
- Cleanup component release logic when selecting checkpoint/restart
  enabled components (Ticket #2135).
- Fixed VT node name detection for Cray XT platforms, and fixed some
  broken VT documentation files.
- Fix a possible race condition in tearing down RDMA CM-based
- Relax error checking on MPI_GRAPH_CREATE.  Thanks to David Singleton
  for pointing out the issue.
- Fix a shared memory "hang" problem that occurred on x86/x86_64
  platforms when used with the GNU >=4.4.x compiler series.
- Add fix for Libtool 2.2.6b's problems with the PGI 10.x compiler
  suite.  Inspired directly from the upstream Libtool patches that fix
  the issue (but we need something working before the next Libtool

Revision / (download) - annotate - [select for diffs] (vendor branch), Sat Dec 12 23:30:01 2009 UTC (13 years, 11 months ago) by asau
Branch: TNF
CVS Tags: pkgsrc-base, pkgsrc-2009Q4-base, pkgsrc-2009Q4
Changes since 1.1: +0 -0 lines
Diff to previous 1.1 (colored)

Import OpenMPI 1.4 as parallel/openmpi.
OpenMPI is open source MPI-2 implementation.

Revision 1.1 / (download) - annotate - [select for diffs], Sat Dec 12 23:30:01 2009 UTC (13 years, 11 months ago) by asau
Branch: MAIN

Initial revision

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