The NetBSD Project

CVS log for pkgsrc/math/py-Scientific/Attic/Makefile

[BACK] Up to [cvs.NetBSD.org] / pkgsrc / math / py-Scientific

Request diff between arbitrary revisions


Default branch: MAIN


Revision 1.73, Tue Jan 25 01:37:49 2022 UTC (2 years, 2 months ago) by wiz
Branch: MAIN
CVS Tags: HEAD
Changes since 1.72: +1 -1 lines
FILE REMOVED

py-Scientific*: remove

Limited to python 2.7, but does not build.
No stable upstream release since 2010, development seems stopped.

Revision 1.72 / (download) - annotate - [select for diffs], Mon Jan 10 23:46:49 2022 UTC (2 years, 3 months ago) by wiz
Branch: MAIN
Changes since 1.71: +3 -3 lines
Diff to previous 1.71 (colored) to selected 1.25 (colored)

*: convert to egg.mk

Revision 1.71 / (download) - annotate - [select for diffs], Wed Dec 8 16:05:35 2021 UTC (2 years, 4 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2021Q4-base, pkgsrc-2021Q4
Changes since 1.70: +2 -2 lines
Diff to previous 1.70 (colored) to selected 1.25 (colored)

revbump for icu and libffi

Revision 1.70 / (download) - annotate - [select for diffs], Wed Sep 29 19:00:58 2021 UTC (2 years, 6 months ago) by adam
Branch: MAIN
Changes since 1.69: +2 -2 lines
Diff to previous 1.69 (colored) to selected 1.25 (colored)

revbump for boost-libs

Revision 1.69 / (download) - annotate - [select for diffs], Wed Apr 21 13:25:00 2021 UTC (2 years, 11 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2021Q3-base, pkgsrc-2021Q3, pkgsrc-2021Q2-base, pkgsrc-2021Q2
Changes since 1.68: +2 -2 lines
Diff to previous 1.68 (colored) to selected 1.25 (colored)

revbump for boost-libs

Revision 1.68 / (download) - annotate - [select for diffs], Mon Oct 12 21:52:02 2020 UTC (3 years, 6 months ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2021Q1-base, pkgsrc-2021Q1, pkgsrc-2020Q4-base, pkgsrc-2020Q4
Changes since 1.67: +2 -2 lines
Diff to previous 1.67 (colored) to selected 1.25 (colored)

math/blas, math/lapack: Install interchangeable BLAS system

Install the new interchangeable BLAS system created by Thomas Orgis,
currently supporting Netlib BLAS/LAPACK, OpenBLAS, cblas, lapacke, and
Apple's Accelerate.framework.  This system allows the user to select any
BLAS implementation without modifying packages or using package options, by
setting PKGSRC_BLAS_TYPES in mk.conf. See mk/blas.buildlink3.mk for details.

This commit should not alter behavior of existing packages as the system
defaults to Netlib BLAS/LAPACK, which until now has been the only supported
implementation.

Details:

Add new mk/blas.buildlink3.mk for inclusion in dependent packages
Install compatible Netlib math/blas and math/lapack packages
Update math/blas and math/lapack MAINTAINER approved by adam@
OpenBLAS, cblas, and lapacke will follow in separate commits
Update direct dependents to use mk/blas.buildlink3.mk
Perform recursive revbump

Revision 1.67 / (download) - annotate - [select for diffs], Fri May 22 10:56:21 2020 UTC (3 years, 10 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2020Q3-base, pkgsrc-2020Q3, pkgsrc-2020Q2-base, pkgsrc-2020Q2
Changes since 1.66: +2 -2 lines
Diff to previous 1.66 (colored) to selected 1.25 (colored)

revbump after updating security/nettle

Revision 1.66 / (download) - annotate - [select for diffs], Wed May 6 14:04:49 2020 UTC (3 years, 11 months ago) by adam
Branch: MAIN
Changes since 1.65: +2 -2 lines
Diff to previous 1.65 (colored) to selected 1.25 (colored)

revbump after boost update

Revision 1.65 / (download) - annotate - [select for diffs], Sun Mar 8 16:50:29 2020 UTC (4 years, 1 month ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2020Q1-base, pkgsrc-2020Q1
Changes since 1.64: +2 -2 lines
Diff to previous 1.64 (colored) to selected 1.25 (colored)

*: recursive bump for libffi

Revision 1.64 / (download) - annotate - [select for diffs], Sat Jan 18 21:49:57 2020 UTC (4 years, 3 months ago) by jperkin
Branch: MAIN
Changes since 1.63: +2 -2 lines
Diff to previous 1.63 (colored) to selected 1.25 (colored)

*: Recursive revision bump for openssl 1.1.1.

Revision 1.63 / (download) - annotate - [select for diffs], Sun Jan 12 20:20:31 2020 UTC (4 years, 3 months ago) by ryoon
Branch: MAIN
Changes since 1.62: +2 -2 lines
Diff to previous 1.62 (colored) to selected 1.25 (colored)

*: Recursive revbump from devel/boost-libs

Revision 1.62 / (download) - annotate - [select for diffs], Thu Dec 19 22:19:17 2019 UTC (4 years, 4 months ago) by joerg
Branch: MAIN
CVS Tags: pkgsrc-2019Q4-base, pkgsrc-2019Q4
Changes since 1.61: +3 -3 lines
Diff to previous 1.61 (colored) to selected 1.25 (colored)

PYTHON_VERSIONS_ACCEPTED must be set before including the Python
fragments.

Revision 1.61 / (download) - annotate - [select for diffs], Mon Sep 2 13:20:00 2019 UTC (4 years, 7 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2019Q3-base, pkgsrc-2019Q3
Changes since 1.60: +2 -2 lines
Diff to previous 1.60 (colored) to selected 1.25 (colored)

Changed PYTHON_VERSIONS_INCOMPATIBLE to PYTHON_VERSIONS_ACCEPTED; needed for future Python 3.8

Revision 1.60 / (download) - annotate - [select for diffs], Thu Aug 22 12:23:30 2019 UTC (4 years, 7 months ago) by ryoon
Branch: MAIN
Changes since 1.59: +2 -2 lines
Diff to previous 1.59 (colored) to selected 1.25 (colored)

Recursive revbump from boost-1.71.0

Revision 1.59 / (download) - annotate - [select for diffs], Sat Jul 20 22:46:32 2019 UTC (4 years, 9 months ago) by wiz
Branch: MAIN
Changes since 1.58: +2 -2 lines
Diff to previous 1.58 (colored) to selected 1.25 (colored)

*: recursive bump for nettle 3.5.1

Revision 1.58 / (download) - annotate - [select for diffs], Mon Jul 1 04:08:31 2019 UTC (4 years, 9 months ago) by ryoon
Branch: MAIN
Changes since 1.57: +2 -2 lines
Diff to previous 1.57 (colored) to selected 1.25 (colored)

Recursive revbump from boost-1.70.0

Revision 1.57 / (download) - annotate - [select for diffs], Fri Apr 26 14:12:41 2019 UTC (4 years, 11 months ago) by maya
Branch: MAIN
CVS Tags: pkgsrc-2019Q2-base, pkgsrc-2019Q2
Changes since 1.56: +2 -2 lines
Diff to previous 1.56 (colored) to selected 1.25 (colored)

fix some whitespace, mostly introduced in the previous
python 3.4 / 3.5 removal commit.

Revision 1.56 / (download) - annotate - [select for diffs], Fri Apr 26 13:14:04 2019 UTC (4 years, 11 months ago) by maya
Branch: MAIN
Changes since 1.55: +2 -2 lines
Diff to previous 1.55 (colored) to selected 1.25 (colored)

Omit mentions of python 34 and 35, after those were removed.

- Includes some whitespace changes, to be handled in a separate commit.

Revision 1.55 / (download) - annotate - [select for diffs], Thu Mar 28 14:10:32 2019 UTC (5 years ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2019Q1-base, pkgsrc-2019Q1
Changes since 1.54: +7 -3 lines
Diff to previous 1.54 (colored) to selected 1.25 (colored)

math/py-Scientific: Fix install on CentOS 7

PLIST was wrong due to build system using python's sys.platorm, which the
package Makefile incorrectly tried to replicate using pkgsrc variables.

Also added LICENSE and fixed one undocumented patch.

Revision 1.54 / (download) - annotate - [select for diffs], Thu Dec 13 19:52:09 2018 UTC (5 years, 4 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2018Q4-base, pkgsrc-2018Q4
Changes since 1.53: +2 -2 lines
Diff to previous 1.53 (colored) to selected 1.25 (colored)

revbump for boost 1.69.0

Revision 1.53 / (download) - annotate - [select for diffs], Thu Aug 16 18:55:00 2018 UTC (5 years, 8 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2018Q3-base, pkgsrc-2018Q3
Changes since 1.52: +2 -2 lines
Diff to previous 1.52 (colored) to selected 1.25 (colored)

revbump after boost-libs update

Revision 1.52 / (download) - annotate - [select for diffs], Tue Jul 3 05:03:23 2018 UTC (5 years, 9 months ago) by adam
Branch: MAIN
Changes since 1.51: +2 -2 lines
Diff to previous 1.51 (colored) to selected 1.25 (colored)

extend PYTHON_VERSIONS_ for Python 3.7

Revision 1.51 / (download) - annotate - [select for diffs], Sun Apr 29 21:31:52 2018 UTC (5 years, 11 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2018Q2-base, pkgsrc-2018Q2
Changes since 1.50: +2 -2 lines
Diff to previous 1.50 (colored) to selected 1.25 (colored)

revbump for boost-libs update

Revision 1.50 / (download) - annotate - [select for diffs], Mon Jan 1 21:18:41 2018 UTC (6 years, 3 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2018Q1-base, pkgsrc-2018Q1
Changes since 1.49: +2 -2 lines
Diff to previous 1.49 (colored) to selected 1.25 (colored)

Revbump after boost update

Revision 1.49 / (download) - annotate - [select for diffs], Thu Aug 24 20:03:29 2017 UTC (6 years, 7 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2017Q4-base, pkgsrc-2017Q4, pkgsrc-2017Q3-base, pkgsrc-2017Q3
Changes since 1.48: +2 -2 lines
Diff to previous 1.48 (colored) to selected 1.25 (colored)

Revbump for boost update

Revision 1.48 / (download) - annotate - [select for diffs], Sun Apr 30 01:21:50 2017 UTC (6 years, 11 months ago) by ryoon
Branch: MAIN
CVS Tags: pkgsrc-2017Q2-base, pkgsrc-2017Q2
Changes since 1.47: +2 -2 lines
Diff to previous 1.47 (colored) to selected 1.25 (colored)

Recursive revbump from boost update

Revision 1.47 / (download) - annotate - [select for diffs], Sun Jan 1 16:06:26 2017 UTC (7 years, 3 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2017Q1-base, pkgsrc-2017Q1
Changes since 1.46: +2 -2 lines
Diff to previous 1.46 (colored) to selected 1.25 (colored)

Revbump after boost update

Revision 1.46 / (download) - annotate - [select for diffs], Sun Jan 1 14:43:46 2017 UTC (7 years, 3 months ago) by wiz
Branch: MAIN
Changes since 1.45: +2 -2 lines
Diff to previous 1.45 (colored) to selected 1.25 (colored)

Add python-3.6 to incompatible versions.

Revision 1.45 / (download) - annotate - [select for diffs], Fri Oct 7 18:26:00 2016 UTC (7 years, 6 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2016Q4-base, pkgsrc-2016Q4
Changes since 1.44: +2 -2 lines
Diff to previous 1.44 (colored) to selected 1.25 (colored)

Revbump post boost update

Revision 1.44 / (download) - annotate - [select for diffs], Sun Aug 28 15:48:33 2016 UTC (7 years, 7 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2016Q3-base, pkgsrc-2016Q3
Changes since 1.43: +1 -2 lines
Diff to previous 1.43 (colored) to selected 1.25 (colored)

Remove unnecessary PLIST_SUBST and FILES_SUBST that are now provided
by the infrastructure.

Mark a couple more packages as not ready for python-3.x.

Revision 1.43 / (download) - annotate - [select for diffs], Sat Jul 9 13:03:55 2016 UTC (7 years, 9 months ago) by wiz
Branch: MAIN
Changes since 1.42: +2 -2 lines
Diff to previous 1.42 (colored) to selected 1.25 (colored)

Remove python33: adapt all packages that refer to it.

Revision 1.42 / (download) - annotate - [select for diffs], Sat Mar 5 11:28:53 2016 UTC (8 years, 1 month ago) by jperkin
Branch: MAIN
CVS Tags: pkgsrc-2016Q2-base, pkgsrc-2016Q2, pkgsrc-2016Q1-base, pkgsrc-2016Q1
Changes since 1.41: +2 -1 lines
Diff to previous 1.41 (colored) to selected 1.25 (colored)

Bump PKGREVISION for security/openssl ABI bump.

Revision 1.41 / (download) - annotate - [select for diffs], Sat Dec 5 21:25:49 2015 UTC (8 years, 4 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2015Q4-base, pkgsrc-2015Q4
Changes since 1.40: +2 -2 lines
Diff to previous 1.40 (colored) to selected 1.25 (colored)

Extend PYTHON_VERSIONS_INCOMPATIBLE to 35

Revision 1.40 / (download) - annotate - [select for diffs], Wed Sep 23 12:00:11 2015 UTC (8 years, 6 months ago) by joerg
Branch: MAIN
CVS Tags: pkgsrc-2015Q3-base, pkgsrc-2015Q3
Changes since 1.39: +2 -2 lines
Diff to previous 1.39 (colored) to selected 1.25 (colored)

Don't force mpi-ch, openmpi works just as well. Don't force manual
libraries when already using the mpicc wrapper.

Revision 1.39 / (download) - annotate - [select for diffs], Thu Sep 25 12:59:30 2014 UTC (9 years, 6 months ago) by fhajny
Branch: MAIN
CVS Tags: pkgsrc-2015Q2-base, pkgsrc-2015Q2, pkgsrc-2015Q1-base, pkgsrc-2015Q1, pkgsrc-2014Q4-base, pkgsrc-2014Q4, pkgsrc-2014Q3-base, pkgsrc-2014Q3
Changes since 1.38: +2 -1 lines
Diff to previous 1.38 (colored) to selected 1.25 (colored)

Fix PLIST for SunOS.

Revision 1.38 / (download) - annotate - [select for diffs], Fri May 9 07:37:10 2014 UTC (9 years, 11 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2014Q2-base, pkgsrc-2014Q2
Changes since 1.37: +2 -2 lines
Diff to previous 1.37 (colored) to selected 1.25 (colored)

Mark packages that are not ready for python-3.3 also not ready for 3.4,
until proven otherwise.

Revision 1.37 / (download) - annotate - [select for diffs], Wed Apr 16 14:51:24 2014 UTC (10 years ago) by wiz
Branch: MAIN
Changes since 1.36: +5 -8 lines
Diff to previous 1.36 (colored) to selected 1.25 (colored)

Update to 2.8.1. Switch to distutils.mk.

2.8 --> 2.8.1
-------------

Improvements:

- The installation procedure was updated to work with recent
  NumPy versions and in a wider range of environments.

Revision 1.36 / (download) - annotate - [select for diffs], Wed Feb 12 23:18:11 2014 UTC (10 years, 2 months ago) by tron
Branch: MAIN
CVS Tags: pkgsrc-2014Q1-base, pkgsrc-2014Q1
Changes since 1.35: +2 -2 lines
Diff to previous 1.35 (colored) to selected 1.25 (colored)

Recursive PKGREVISION bump for OpenSSL API version bump.

Revision 1.35 / (download) - annotate - [select for diffs], Sat Jan 25 10:30:13 2014 UTC (10 years, 2 months ago) by wiz
Branch: MAIN
Changes since 1.34: +2 -1 lines
Diff to previous 1.34 (colored) to selected 1.25 (colored)

Mark packages as not ready for python-3.x where applicable;
either because they themselves are not ready or because a
dependency isn't. This is annotated by
PYTHON_VERSIONS_INCOMPATIBLE=  33 # not yet ported as of x.y.z
or
PYTHON_VERSIONS_INCOMPATIBLE=  33 # py-foo, py-bar
respectively, please use the same style for other packages,
and check during updates.

Use versioned_dependencies.mk where applicable.
Use REPLACE_PYTHON instead of handcoded alternatives, where applicable.
Reorder Makefile sections into standard order, where applicable.

Remove PYTHON_VERSIONS_INCLUDE_3X lines since that will be default
with the next commit.

Whitespace cleanups and other nits corrected, where necessary.

Revision 1.34 / (download) - annotate - [select for diffs], Sun Sep 1 12:14:07 2013 UTC (10 years, 7 months ago) by obache
Branch: MAIN
CVS Tags: pkgsrc-2013Q4-base, pkgsrc-2013Q4, pkgsrc-2013Q3-base, pkgsrc-2013Q3
Changes since 1.33: +2 -1 lines
Diff to previous 1.33 (colored) to selected 1.25 (colored)

recursive bump from hdf5 shlib major bump.

Revision 1.33 / (download) - annotate - [select for diffs], Tue Sep 11 23:04:30 2012 UTC (11 years, 7 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2013Q2-base, pkgsrc-2013Q2, pkgsrc-2013Q1-base, pkgsrc-2013Q1, pkgsrc-2012Q4-base, pkgsrc-2012Q4, pkgsrc-2012Q3-base, pkgsrc-2012Q3
Changes since 1.32: +1 -3 lines
Diff to previous 1.32 (colored) to selected 1.25 (colored)

"user-destdir" is default these days

Revision 1.32 / (download) - annotate - [select for diffs], Sat May 29 03:18:54 2010 UTC (13 years, 10 months ago) by obache
Branch: MAIN
CVS Tags: pkgsrc-2012Q2-base, pkgsrc-2012Q2, pkgsrc-2012Q1-base, pkgsrc-2012Q1, pkgsrc-2011Q4-base, pkgsrc-2011Q4, pkgsrc-2011Q3-base, pkgsrc-2011Q3, pkgsrc-2011Q2-base, pkgsrc-2011Q2, pkgsrc-2011Q1-base, pkgsrc-2011Q1, pkgsrc-2010Q4-base, pkgsrc-2010Q4, pkgsrc-2010Q3-base, pkgsrc-2010Q3, pkgsrc-2010Q2-base, pkgsrc-2010Q2
Changes since 1.31: +9 -12 lines
Diff to previous 1.31 (colored) to selected 1.25 (colored)

Update py-Scientific to 2.8.
Based on PR#43282 by Wen Heping.

2.7.9 --> 2.7.10
----------------

Bug fixes:

- Removed all occurrences of "as" as a variable name for compatibility
  with Python 2.6.

- Installation without the netCDF module did not work.

Improvements:

- Vector.dyadicProduct() was replaced by a more efficient implementation.

- Scientific.IO.PDB: Atom objects now have a parent attribute whose
  value is the containing group.


2.7.8 --> 2.7.9
---------------

License change: ScientificPython is now distributed under the
CeCILL-C license, which is an adaptation of the LGPL to French
law. The previously used CeCILL license, similar to the GPL, was
considered too restrictive.

Bug fixes:

- MPI interfaces did not work correctly with NumPy and/or Python 2.5.

Improvements:

- Compilation script for mpipython works around a Python configuration
  bug under MacOS X.
- Docstrings have been cleaned up.

2.7.7 --> 2.7.8
---------------

Bug fixes:

- Due to a typo in Scientific.IO.PDBSpaceGroups, some space group
  names were not found in the space group table.

Improvements:

- Vector objects can now be multiplied with NumPy scalar objects
  (which is what you get when extracting numbers from NumPy
  arrays). Due to the way NumPy scalars handle multiplication, the
  result used to be an array rather than a Vector, which caused
  various applications to crash.

- The build procedure under Windows has been improved. It can
  generate a binary installer that includes the netCDF DLL,
  making ScientificPython independent of a netCDF installation.

2.7.6 --> 2.7.7
---------------

Bug fixes:

- Installation on Windows didn't work because the Unix maths libraries
  don't exist there.


Improvements:

- InterpolatingFunction and TensorField objects can represent
  periodic functions/fields.

- DistributedComputing: the watchdog period of slave processes is now
  a user-definable parameter.

- PDBSpaceGroups was simplified, making it shorter and faster to load.

- Scientific.N contains the array type object in the variable array_type.
  This makes it possible to write Pyrex modules using arrays in such a
  way that they always use the numeric module for which ScientificPython
  was compiled.


2.7.5 --> 2.7.6
---------------

Bug fixes:

- NumPy compatibility fixes.

- Pyro 3.6 compatibility fix in DistributedComputing.MasterSlave


2.7.4 --> 2.7.5
---------------

New features:

- Scaling, inversion, and shear transformations added to
  Geometry.Transformations

Improvements:

- PDB parser handles CRYST1, SCALEn and MTRIXn records
- Better identification of the Numerics package that is being used

Bug fixes:

- Scientific_affinitypropagation.c compiles with NumPy


2.7.3 --> 2.7.4
---------------

New features:

- New module Clustering.AffinityPropagation.
- New class BSP.ParRootSequence.

Bug fixes:

- Replaced float equality test in Functions.InterpolatingFunction
- Removed exception for order > 1 in Derivatives.DerivVar.__init__
- Fixed reading of non-string attributes from netCDF files.

Improvements:

- New methods getBinIndices and getBinCount in Statistics.Histogram.Histogram
- Physics.PhysicalQuantities: unit definitions added to doc string

2.7.2 --> 2.7.3
---------------

Improvements:

- Added multi-module setup for master-slave computations.
- More information available through task_manager.
- task_manager can start slave processes.

2.7.1 --> 2.7.2
---------------

Bug fixes:

- Scientific_netcdf would not compile with NumPy under Python 2.4
  because NumPy also defined Py_ssize_t.

2.7 --> 2.7.1
-------------

Improvements:

- NumPy compatibility. Scientific_netcdf was revised by hand.
  The Python code was run through numpy.oldnumeric.alter_code1 to
  identify the critical sections, which were then all handled in
  some way. It is possible that there are still incompatibilities
  of the kind that numpy.oldnumeric.alter_code1 cannot detect


2.5.12hg --> 2.7
----------------

New features:

- Subpackage Scientific.DistributedComputing for easy parallelization
  of independent tasks.

2.5.11 --> 2.5.12hg
-------------------

Bug fixes:

- VRML2 output would crash for scenes containing Line objects
- Pyrex implmentation of vector objects could crash instead of raising
  an exception in divide operations.
- Pyrex implmentation of vector objects would raise exceptions incorrectly
  under Python 2.5

Improvements:

- builds Macintosh packages with documentation and examples

2.5.10 --> 2.5.11
-----------------

Bug fixes:

- Pyrex implementation of vector objects raised exceptions in comparisons
- Pyrex implementation of vector objects did not accept negative indices
- Some object deletions during conversion to epydoc had to be reversed

Improvements:

- Two test suites

2.5.9 --> 2.5.10
----------------

Bug fixes:

- Fixed netCDF error handling

Improvements:

- Support for NumPy (not very well tested yet)
- Scientific.NumberDict more efficient

2.5.8 --> 2.5.9
---------------

Improvements:

- Scientifc.IO.NetCDF supports the new 64-bit data structures in Python 2.5
  (not yet tested on a 64-bit machine)
- Docstrings modified for use with Epydoc.

2.5.7 --> 2.5.8
---------------

Bug fixes:

- Syntax error in Scientific.IO.PDB
- Attribute deletion in netCDF file and variable objects caused a crash.

2.5.6 --> 2.5.7
----------------

Bug fixes:

- Tensor-vector multiplication was incorrect with the Pyrex implementation
  of vector objects.

2.5.5 --> 2.5.6
----------------

Bug fixes:

- Scientific.BSP.ParClass did not pass on __call__ and __getitem__
  to local class
- Scientific.BSP.ParClass: Class wrappers did not always return the right
  global object.

2.5.4 --> 2.5.5
----------------

Bug fixes:

- Scientific.IO.NetCDF.NetCDFVariable.assignValue() had incomplete error
  reporting. Some errors would not raise exceptions as required.


2.5.3 --> 2.5.4
----------------

Improvements:

- A "test" method on MPI request objects permits to check if data
  is available (thanks to Jakob Schiotz for this addition).

Bug fixes:

- The new Pyrex vector objects could not be pickled.

2.5.1 --> 2.5.3
----------------

Improvements:

- The class Scientific.Geometry.Vector has been reimplemented in Pyrex,
  yielding much faster vector operations. There is, however, the restriction
  that the vector elements must be of type "float". For the rare applications
  where this condition is not fulfilled (such as
  Scientific.Functions.Derivatives.DerivVector), the Python implementation
  remains accessible as Scientific.Geometry.VectorModule.Vector.

2.4.9 --> 2.5.1
----------------

Improvements:

- Vector and Tensor objects permit comparison with other types
  of objects (which always return False)
- Numarray can be used instead of Numeric as far as possible
  (see README for details)

2.4.7 --> 2.4.9:
----------------

Bug fixes:

- Integer array attributes caused a TypeError with recent versions of
  Numeric (that don't do silent casts from Long to Int any more).

Additions:

- Method "threeAngles" in Geometry.Transformation.Rotation.


2.4.6 --> 2.4.7:
----------------

Bug fixes:

- Scientific.BSP: alltrue() and anytrue() sometimes returned wrong results.

Additions:

- Scientific.Visualization.VMD can now correctly launch VMD under Windows

Revision 1.31 / (download) - annotate - [select for diffs], Thu Mar 5 18:51:30 2009 UTC (15 years, 1 month ago) by joerg
Branch: MAIN
CVS Tags: pkgsrc-2010Q1-base, pkgsrc-2010Q1, pkgsrc-2009Q4-base, pkgsrc-2009Q4, pkgsrc-2009Q3-base, pkgsrc-2009Q3, pkgsrc-2009Q2-base, pkgsrc-2009Q2, pkgsrc-2009Q1-base, pkgsrc-2009Q1
Changes since 1.30: +1 -2 lines
Diff to previous 1.30 (colored) to selected 1.25 (colored)

Remove PYBINMODULE. All it did was mark some packages as not available
on some platforms that lacked shared library support in the past. The
list hasn't been maintained at all and the gain is very limited, so just
get rid of it.

Revision 1.30 / (download) - annotate - [select for diffs], Thu Jun 12 02:14:36 2008 UTC (15 years, 10 months ago) by joerg
Branch: MAIN
CVS Tags: pkgsrc-2008Q4-base, pkgsrc-2008Q4, pkgsrc-2008Q3-base, pkgsrc-2008Q3, pkgsrc-2008Q2-base, pkgsrc-2008Q2, cwrapper, cube-native-xorg-base, cube-native-xorg
Changes since 1.29: +6 -2 lines
Diff to previous 1.29 (colored) to selected 1.25 (colored)

Add DESTDIR support.

Revision 1.29 / (download) - annotate - [select for diffs], Fri Apr 25 20:39:10 2008 UTC (15 years, 11 months ago) by joerg
Branch: MAIN
Changes since 1.28: +1 -3 lines
Diff to previous 1.28 (colored) to selected 1.25 (colored)

Update PYTHON_VERSIONS_COMPATIBLE
- assume that Python 2.4 and 2.5 are compatible and allow checking for
fallout.
- remove PYTHON_VERSIONS_COMPATIBLE that are obsoleted by the 2.3+
default. Modify the others to deal with the removals.

Revision 1.28 / (download) - annotate - [select for diffs], Fri Jun 2 23:33:30 2006 UTC (17 years, 10 months ago) by joerg
Branch: MAIN
CVS Tags: pkgsrc-2008Q1-base, pkgsrc-2008Q1, pkgsrc-2007Q4-base, pkgsrc-2007Q4, pkgsrc-2007Q3-base, pkgsrc-2007Q3, pkgsrc-2007Q2-base, pkgsrc-2007Q2, pkgsrc-2007Q1-base, pkgsrc-2007Q1, pkgsrc-2006Q4-base, pkgsrc-2006Q4, pkgsrc-2006Q3-base, pkgsrc-2006Q3, pkgsrc-2006Q2-base, pkgsrc-2006Q2
Changes since 1.27: +2 -3 lines
Diff to previous 1.27 (colored) to selected 1.25 (colored)

Dependency (py-Numeric) doesn't exist for Python 2.0 and 2.1.

Revision 1.27 / (download) - annotate - [select for diffs], Thu Apr 6 06:22:21 2006 UTC (18 years ago) by reed
Branch: MAIN
Changes since 1.26: +3 -3 lines
Diff to previous 1.26 (colored) to selected 1.25 (colored)

Over 1200 files touched but no revisions bumped :)

RECOMMENDED is removed. It becomes ABI_DEPENDS.

BUILDLINK_RECOMMENDED.foo becomes BUILDLINK_ABI_DEPENDS.foo.

BUILDLINK_DEPENDS.foo becomes BUILDLINK_API_DEPENDS.foo.

BUILDLINK_DEPENDS does not change.

IGNORE_RECOMMENDED (which defaulted to "no") becomes USE_ABI_DEPENDS
which defaults to "yes".

Added to obsolete.mk checking for IGNORE_RECOMMENDED.

I did not manually go through and fix any aesthetic tab/spacing issues.

I have tested the above patch on DragonFly building and packaging
subversion and pkglint and their many dependencies.

I have also tested USE_ABI_DEPENDS=no on my NetBSD workstation (where I
have used IGNORE_RECOMMENDED for a long time). I have been an active user
of IGNORE_RECOMMENDED since it was available.

As suggested, I removed the documentation sentences suggesting bumping for
"security" issues.

As discussed on tech-pkg.

I will commit to revbump, pkglint, pkg_install, createbuildlink separately.

Note that if you use wip, it will fail!  I will commit to pkgsrc-wip
later (within day).

Revision 1.26 / (download) - annotate - [select for diffs], Fri Mar 24 10:59:19 2006 UTC (18 years, 1 month ago) by joerg
Branch: MAIN
CVS Tags: pkgsrc-2006Q1-base, pkgsrc-2006Q1
Changes since 1.25: +2 -2 lines
Diff to previous 1.25 (colored)

Explicitly link mpipython with pthread, since libpython is multithreaded.

Revision 1.25 / (download) - annotate - [selected], Sat Mar 4 21:30:08 2006 UTC (18 years, 1 month ago) by jlam
Branch: MAIN
Changes since 1.24: +2 -2 lines
Diff to previous 1.24 (colored)

Point MAINTAINER to pkgsrc-users@NetBSD.org in the case where no
developer is officially maintaining the package.

The rationale for changing this from "tech-pkg" to "pkgsrc-users" is
that it implies that any user can try to maintain the package (by
submitting patches to the mailing list).  Since the folks most likely
to care about the package are the folks that want to use it or are
already using it, this would leverage the energy of users who aren't
developers.

Revision 1.24 / (download) - annotate - [select for diffs], Sun Feb 5 23:10:03 2006 UTC (18 years, 2 months ago) by joerg
Branch: MAIN
Changes since 1.23: +2 -2 lines
Diff to previous 1.23 (colored) to selected 1.25 (colored)

Recursive revision bump / recommended bump for gettext ABI change.

Revision 1.23 / (download) - annotate - [select for diffs], Mon Dec 5 20:50:37 2005 UTC (18 years, 4 months ago) by rillig
Branch: MAIN
CVS Tags: pkgsrc-2005Q4-base, pkgsrc-2005Q4
Changes since 1.22: +5 -5 lines
Diff to previous 1.22 (colored) to selected 1.25 (colored)

Fixed pkglint warnings. The warnings are mostly quoting issues, for
example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some
other changes are outlined in

    http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html

Revision 1.22 / (download) - annotate - [select for diffs], Mon Apr 11 21:46:31 2005 UTC (19 years ago) by tv
Branch: MAIN
CVS Tags: pkgsrc-2005Q3-base, pkgsrc-2005Q3, pkgsrc-2005Q2-base, pkgsrc-2005Q2
Changes since 1.21: +1 -2 lines
Diff to previous 1.21 (colored) to selected 1.25 (colored)

Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used.

Revision 1.21 / (download) - annotate - [select for diffs], Sun Oct 3 00:12:57 2004 UTC (19 years, 6 months ago) by tv
Branch: MAIN
CVS Tags: pkgsrc-2005Q1-base, pkgsrc-2005Q1, pkgsrc-2004Q4-base, pkgsrc-2004Q4
Changes since 1.20: +2 -1 lines
Diff to previous 1.20 (colored) to selected 1.25 (colored)

Libtool fix for PR pkg/26633, and other issues.  Update libtool to 1.5.10
in the process.  (More information on tech-pkg.)

Bump PKGREVISION and BUILDLINK_DEPENDS of all packages using libtool and
installing .la files.

Bump PKGREVISION (only) of all packages depending directly on the above
via a buildlink3 include.

Revision 1.20 / (download) - annotate - [select for diffs], Thu Jul 22 09:16:03 2004 UTC (19 years, 9 months ago) by recht
Branch: MAIN
CVS Tags: pkgsrc-2004Q3-base, pkgsrc-2004Q3
Changes since 1.19: +2 -2 lines
Diff to previous 1.19 (colored) to selected 1.25 (colored)

add python as category
ok'd a while back at pkgsrcCon by agc and wiz

Revision 1.19 / (download) - annotate - [select for diffs], Sat Apr 24 21:01:28 2004 UTC (19 years, 11 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2004Q2-base, pkgsrc-2004Q2
Changes since 1.18: +7 -6 lines
Diff to previous 1.18 (colored) to selected 1.25 (colored)

Convert to bl3, and fix PLIST on NetBSD-2*.

Revision 1.18 / (download) - annotate - [select for diffs], Thu Feb 12 16:53:50 2004 UTC (20 years, 2 months ago) by recht
Branch: MAIN
CVS Tags: pkgsrc-2004Q1-base, pkgsrc-2004Q1
Changes since 1.17: +2 -3 lines
Diff to previous 1.17 (colored) to selected 1.25 (colored)

Fix build by including mpi-ch's buildlink2.mk rather than just depending
on it.

Revision 1.17 / (download) - annotate - [select for diffs], Sun Jan 18 23:57:50 2004 UTC (20 years, 3 months ago) by recht
Branch: MAIN
Changes since 1.16: +11 -17 lines
Diff to previous 1.16 (colored) to selected 1.25 (colored)

update to 2.4.5

2.4.3 --> 2.4.4:
----------------
Bug fixes:
NetCDF error messages should now be correct. No more "unknown errors"!

2.4 --> 2.4.1:
--------------
Bug fixes:
- Scientific.MPI did not contain the _C_API object needed by C extension
  modules that call MPI.
- The arguments to the receiveString method are now optional, as documented.

2.3.3 --> 2.4:
--------------
Bug fixes:
- Memory function calculation in Scientific.Signals.Models
  returned a wrong value for the first point.
- Some indexing problems in Scientific.IO.NetCDF were fixed;
  none of them caused wrong results, just unjustified exceptions.

2.3.2 --> 2.3.3:
----------------
Bug fixes:
- The method divide() assumed the wrong coefficient order.
New features:
- Module Scientific.Signals.Models
- Class Scientific.Statistics.Histogram.WeightedHistogram

2.3.1 --> 2.3.2:
----------------
Incompatible changes:
- Specification of routines in Scientific.BSP changed.

2.2 --> 2.3.1
-------------
New features:
- New modules Scientific.BSP and Scientific.BSP.IO

Revision 1.16 / (download) - annotate - [select for diffs], Thu Jul 17 21:48:02 2003 UTC (20 years, 9 months ago) by grant
Branch: MAIN
CVS Tags: pkgsrc-2003Q4-base, pkgsrc-2003Q4
Changes since 1.15: +2 -2 lines
Diff to previous 1.15 (colored) to selected 1.25 (colored)

s/netbsd.org/NetBSD.org/

Revision 1.15 / (download) - annotate - [select for diffs], Mon Jun 2 01:18:24 2003 UTC (20 years, 10 months ago) by jschauma
Branch: MAIN
Changes since 1.14: +2 -2 lines
Diff to previous 1.14 (colored) to selected 1.25 (colored)

Use tech-pkg@ in favor of packages@ as MAINTAINER for orphaned packages.
Should anybody feel like they could be the maintainer for any of thewe packages,
please adjust.

Revision 1.14 / (download) - annotate - [select for diffs], Wed Oct 9 17:39:55 2002 UTC (21 years, 6 months ago) by wiz
Branch: MAIN
CVS Tags: netbsd-1-6-1-base, netbsd-1-6-1
Changes since 1.13: +4 -3 lines
Diff to previous 1.13 (colored) to selected 1.25 (colored)

buildlink1 -> buildlink2.

Revision 1.13 / (download) - annotate - [select for diffs], Sat Sep 21 23:46:54 2002 UTC (21 years, 7 months ago) by jlam
Branch: MAIN
Changes since 1.12: +2 -2 lines
Diff to previous 1.12 (colored) to selected 1.25 (colored)

Strip the ".buildlink" from the names of the python application and
extension Makefile fragments, because they really don't have anything to
do with the buildlink[12] frameworks.  Change all the Makefiles that use
application.buildlink.mk and extension.buildlink.mk to use application.mk
and extension.mk instead.

Revision 1.12 / (download) - annotate - [select for diffs], Thu Jan 17 12:02:25 2002 UTC (22 years, 3 months ago) by drochner
Branch: MAIN
CVS Tags: pkgviews-base, pkgviews, netbsd-1-6-RELEASE-base, netbsd-1-6, netbsd-1-5-PATCH003, buildlink2-base, buildlink2
Changes since 1.11: +7 -12 lines
Diff to previous 1.11 (colored) to selected 1.25 (colored)

move to canonical pkg name (pyX.Y-pkg-vers),
append version suffix to extended python interpreter,
don't install docs (separate pkg now)

Revision 1.11 / (download) - annotate - [select for diffs], Wed Jan 16 20:32:42 2002 UTC (22 years, 3 months ago) by drochner
Branch: MAIN
Changes since 1.10: +4 -1 lines
Diff to previous 1.10 (colored) to selected 1.25 (colored)

we need at least Python 2.0.1nb1 or 2.1.1nb1, 2.2 doesn't work at all

Revision 1.10 / (download) - annotate - [select for diffs], Wed Jan 16 19:45:26 2002 UTC (22 years, 3 months ago) by drochner
Branch: MAIN
Changes since 1.9: +4 -4 lines
Diff to previous 1.9 (colored) to selected 1.25 (colored)

use buildlink files for Python and py-Numeric

Revision 1.9 / (download) - annotate - [select for diffs], Mon May 14 16:22:35 2001 UTC (22 years, 11 months ago) by drochner
Branch: MAIN
Changes since 1.8: +7 -18 lines
Diff to previous 1.8 (colored) to selected 1.25 (colored)

use USE_PYTHON

Revision 1.8 / (download) - annotate - [select for diffs], Sun Apr 22 20:15:46 2001 UTC (23 years ago) by jtb
Branch: MAIN
CVS Tags: netbsd-1-5-PATCH001
Changes since 1.7: +3 -7 lines
Diff to previous 1.7 (colored) to selected 1.25 (colored)

Only install the include files once.

Revision 1.7 / (download) - annotate - [select for diffs], Sat Apr 14 21:43:55 2001 UTC (23 years ago) by jtb
Branch: MAIN
Changes since 1.6: +2 -2 lines
Diff to previous 1.6 (colored) to selected 1.25 (colored)

Change MAINTAINER section to packages@netbsd.org

Revision 1.6 / (download) - annotate - [select for diffs], Sun Apr 8 22:53:14 2001 UTC (23 years ago) by jtb
Branch: MAIN
Changes since 1.5: +5 -1 lines
Diff to previous 1.5 (colored) to selected 1.25 (colored)

Added defaults for EVAL_PREFIX.

Revision 1.5 / (download) - annotate - [select for diffs], Fri Mar 30 22:23:07 2001 UTC (23 years ago) by jtb
Branch: MAIN
Changes since 1.4: +25 -27 lines
Diff to previous 1.4 (colored) to selected 1.25 (colored)

Updated to py-Scientific-2.2.

2.1.5 --> 2.2
-------------

Bug fixes:

- The sign convention for rotation angles was not correctly applied
  in Scientific.Geometry.Transformation and Scientific.Geometry.Quaternions.
  Everything was consistent, but with the wrong sign.

Improvements:

- Scientific.IO.PDB can handle a larger range of variant formats for DNA

New features:

- New module Scientific.Visualization.VPython.

- Scientific.IO.TextFile also handles bzip2 compressed files
  (extension .bz2). This only works if bzip2 is installed.


2.1.4 --> 2.1.5
---------------

New features:

- Scientific.TkWidgets.TkPlotCanvas:
  - Popup menu on right button
  - Value display on middle button
  - HorizontalLine, VerticalLine objects

Modifications:

- MPI interface no longer assumes that MPI_Op and MPI_Datatype are
  integers (they aren't in LAM, for example).


2.1.3 --> 2.1.4
---------------

New features:

- New MPI functions implemented by Jakob Schiotz:
  - nonblocking send and receive
  - abort
  - reduce and allreduce

Modifications:

- The Python interpreter lock is released during calls to the netCDF
  library, permitting other threads to continue during I/O operations.
  An internal lock has been added to prevent reentrant calls to the
  netCDF library, which is not thread safe.
  (If you don't understand any of this, you shouldn't care, it has
  no consequences unless you use threads.)
- Methods receive and receiveString on MPI communicator objects
  can be called without source and tag arguments (defaults to None).


Bug fixes:

- The compilation script did not work correctly for MPI support


2.1.2 --> 2.1.3
---------------

New features:

- Some small utility widgets have been added to Scientific.TkWidgets.
  They are not particularly "scientific", but not worth the effort
  of a separate distribution.

Bug fixes:

- The abs() function didn't work on DerivVar objects (modules
  Scientific.Functions.Derivatives and Scientific.Functions.FirstDerivatives)
  with negative values.

- The method projectionOf in Scientific.Geometry.Objects3D.Plane was
  wrong.


2.1.1 --> 2.1.2
---------------

Installation:

- The mpipython executable is compiled using 'mpicc', which should simplify
  installation significantly because all library specifications are
  automatically taken into account. In other words, MPI support should
  work on all platforms without any modifications to the Setup file.
  (Thanks to Jakob Schiotz for this suggestion!)

- Some 'extern' declarations were changed to 'staticforward' to please
  some compilers.

Documentation:

- the documentation for the methods receive and receiveString were
  wrong.


2.1.0 --> 2.1.1
---------------

Bug fixes:

- The upper bound for MPI message tags was not treated correctly,
  leading to a bound of zero on some platforms.

Modifications:

- The methods sendArray and sendString were combined into a single
  method send.

- broadcastArray was renamed to broadcast, shareArray was renamed to share,
  receiveArray was renamed to receive. The only function that retains
  a data type indication is receiveString.


2.0.1 --> 2.1.0
---------------

Additions:

- MPI interface in Scientific.MPI

Revision 1.4 / (download) - annotate - [select for diffs], Thu Mar 29 01:00:10 2001 UTC (23 years ago) by jtb
Branch: MAIN
Changes since 1.3: +2 -2 lines
Diff to previous 1.3 (colored) to selected 1.25 (colored)

Fix typo which caused i386 bulk build problem.
mpich->=1.2.1 becomes mpich>=1.2.1 .

Revision 1.3 / (download) - annotate - [select for diffs], Sun Mar 25 21:43:02 2001 UTC (23 years ago) by jtb
Branch: MAIN
Changes since 1.2: +2 -2 lines
Diff to previous 1.2 (colored) to selected 1.25 (colored)

Changed the build process to work with the recently updated mpi-ch package
which installs its parts in locations different to the previous version.

Revision 1.2 / (download) - annotate - [select for diffs], Sat Feb 17 18:22:38 2001 UTC (23 years, 2 months ago) by wiz
Branch: MAIN
Changes since 1.1: +2 -1 lines
Diff to previous 1.1 (colored) to selected 1.25 (colored)

Update to new COMMENT style: COMMENT var in Makefile instead of pkg/COMMENT.

Revision 1.1.1.1 / (download) - annotate - [select for diffs] (vendor branch), Tue Jan 30 02:01:43 2001 UTC (23 years, 2 months ago) by jtb
Branch: TNF
CVS Tags: pkgsrc-base
Changes since 1.1: +0 -0 lines
Diff to previous 1.1 (colored) to selected 1.25 (colored)

Initial import of new py-Scientific package:
Python modules for scientific computing

Revision 1.1 / (download) - annotate - [select for diffs], Tue Jan 30 02:01:43 2001 UTC (23 years, 2 months ago) by jtb
Branch: MAIN
Diff to selected 1.25 (colored)

Initial revision

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