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File: [cvs.NetBSD.org] / pkgsrc / biology / samtools / Makefile (download)

Revision 1.5, Thu Apr 25 07:32:37 2019 UTC (4 years, 11 months ago) by maya
Branch: MAIN
CVS Tags: pkgsrc-2019Q2-base, pkgsrc-2019Q2
Changes since 1.4: +2 -1 lines

PKGREVISION bump for anything using python without a PYPKGPREFIX.

This is a semi-manual PKGREVISION bump.

# $NetBSD: Makefile,v 1.5 2019/04/25 07:32:37 maya Exp $

DISTNAME=	samtools-1.9
PKGREVISION=	1
CATEGORIES=	biology
MASTER_SITES=	${MASTER_SITE_GITHUB:=samtools/}
EXTRACT_SUFX=	.tar.bz2
GITHUB_RELEASE=	${PKGVERSION_NOREV}

MAINTAINER=	bacon@NetBSD.org
HOMEPAGE=	http://www.htslib.org/
COMMENT=	Tools for manipulating next-generation sequencing data
LICENSE=	mit

USE_TOOLS+=		gmake perl:run
GNU_CONFIGURE=		yes
CONFIGURE_ARGS+=	--with-htslib=system
TEST_TARGET=		test

REPLACE_PERL=		misc/*.pl
REPLACE_PERL+=		misc/plot-bamstats
REPLACE_PERL+=		test/test.pl
REPLACE_PYTHON=		misc/*.py

.include "../../devel/zlib/buildlink3.mk"
.include "../../biology/htslib/buildlink3.mk"
.include "../../lang/python/application.mk"
.include "../../mk/curses.buildlink3.mk"
.include "../../mk/bsd.pkg.mk"