CVS log for pkgsrc/biology/py-macs2/Makefile
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Revision 1.12: download - view: text, markup, annotated - select for diffs
Tue Apr 15 13:03:39 2025 UTC (8 days, 6 hours ago) by adam
Branches: MAIN
CVS tags: HEAD
Diff to: previous 1.11: preferred, colored
Changes since revision 1.11: +3 -3
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Fix PLIST after py-setuptools update; bump depends and revision
Revision 1.11: download - view: text, markup, annotated - select for diffs
Wed Mar 5 09:19:00 2025 UTC (7 weeks ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2025Q1-base,
pkgsrc-2025Q1
Diff to: previous 1.10: preferred, colored
Changes since revision 1.10: +5 -2
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py-macs2: fix wheel name for latest setuptools and depend on it
Bump PKGREVISION.
Revision 1.10: download - view: text, markup, annotated - select for diffs
Mon Nov 11 07:27:53 2024 UTC (5 months, 1 week ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2024Q4-base,
pkgsrc-2024Q4
Diff to: previous 1.9: preferred, colored
Changes since revision 1.9: +1 -2
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py-*: remove unused tool dependency
py-setuptools includes the py-wheel functionality nowadays
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Mon Oct 14 06:45:32 2024 UTC (6 months, 1 week ago) by wiz
Branches: MAIN
Diff to: previous 1.8: preferred, colored
Changes since revision 1.8: +1 -4
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*: clean-up after python38 removal
Revision 1.8: download - view: text, markup, annotated - select for diffs
Mon Dec 25 10:21:17 2023 UTC (15 months, 4 weeks ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2024Q3-base,
pkgsrc-2024Q3,
pkgsrc-2024Q2-base,
pkgsrc-2024Q2,
pkgsrc-2024Q1-base,
pkgsrc-2024Q1,
pkgsrc-2023Q4-base,
pkgsrc-2023Q4
Diff to: previous 1.7: preferred, colored
Changes since revision 1.7: +3 -1
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py-macs2: add missing tool dependencies
Revision 1.7: download - view: text, markup, annotated - select for diffs
Sat Dec 23 16:15:02 2023 UTC (16 months ago) by bacon
Branches: MAIN
Diff to: previous 1.6: preferred, colored
Changes since revision 1.6: +6 -5
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biology/py-macs2: Update to 2.2.9.1
Minor updates from 2.2.8
Add hacks for cython 3 to pkgsrc patches
This is likely the final release of MACS2
MACS3 package is forthcoming
Changes: https://github.com/macs3-project/MACS/releases
Revision 1.6: download - view: text, markup, annotated - select for diffs
Sun Nov 5 23:48:31 2023 UTC (17 months, 2 weeks ago) by wiz
Branches: MAIN
Diff to: previous 1.5: preferred, colored
Changes since revision 1.5: +2 -2
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py-macs2: not for Python 3.12
Revision 1.5: download - view: text, markup, annotated - select for diffs
Tue Aug 1 23:20:38 2023 UTC (20 months, 3 weeks ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2023Q3-base,
pkgsrc-2023Q3
Diff to: previous 1.4: preferred, colored
Changes since revision 1.4: +2 -2
lines
*: remove more references to Python 3.7
Revision 1.4: download - view: text, markup, annotated - select for diffs
Sat Jul 1 08:37:34 2023 UTC (21 months, 3 weeks ago) by wiz
Branches: MAIN
Diff to: previous 1.3: preferred, colored
Changes since revision 1.3: +2 -2
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*: restrict py-numpy users to 3.9+ in preparation for update
Revision 1.3: download - view: text, markup, annotated - select for diffs
Thu May 18 14:01:58 2023 UTC (23 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2023Q2-base,
pkgsrc-2023Q2
Diff to: previous 1.2: preferred, colored
Changes since revision 1.2: +3 -3
lines
biology/py-macs2: Update to 2.2.8
Adds support for python 3.11
Changes: https://github.com/macs3-project/MACS/releases
Revision 1.2: download - view: text, markup, annotated - select for diffs
Sun Jan 29 00:33:04 2023 UTC (2 years, 2 months ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2023Q1-base,
pkgsrc-2023Q1
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +3 -1
lines
py-macs2: does not support python 2.x
Revision 1.1: download - view: text, markup, annotated - select for diffs
Sun Jan 22 23:30:11 2023 UTC (2 years, 3 months ago) by bacon
Branches: MAIN
biology/py-macs2: Identify transcription factor binding sites
MACS is a tool for chromatin immunoprecipitation (ChIP) sequence
analysis. MACS empirically models the length of the sequenced ChIP
fragments, which tend to be shorter than sonication or library
construction size estimates, and uses it to improve the spatial
resolution of predicted binding sites.
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