CVS log for pkgsrc/biology/plink/distinfo
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Default branch: MAIN
Revision 1.5: download - view: text, markup, annotated - select for diffs
Tue Oct 26 10:03:42 2021 UTC (3 years, 1 month ago) by nia
Branches: MAIN
CVS tags: pkgsrc-2024Q3-base,
pkgsrc-2024Q3,
pkgsrc-2024Q2-base,
pkgsrc-2024Q2,
pkgsrc-2024Q1-base,
pkgsrc-2024Q1,
pkgsrc-2023Q4-base,
pkgsrc-2023Q4,
pkgsrc-2023Q3-base,
pkgsrc-2023Q3,
pkgsrc-2023Q2-base,
pkgsrc-2023Q2,
pkgsrc-2023Q1-base,
pkgsrc-2023Q1,
pkgsrc-2022Q4-base,
pkgsrc-2022Q4,
pkgsrc-2022Q3-base,
pkgsrc-2022Q3,
pkgsrc-2022Q2-base,
pkgsrc-2022Q2,
pkgsrc-2022Q1-base,
pkgsrc-2022Q1,
pkgsrc-2021Q4-base,
pkgsrc-2021Q4,
HEAD
Diff to: previous 1.4: preferred, colored
Changes since revision 1.4: +2 -2
lines
biology: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and
SHA512 hashes
Revision 1.4: download - view: text, markup, annotated - select for diffs
Thu Oct 7 13:19:41 2021 UTC (3 years, 1 month ago) by nia
Branches: MAIN
Diff to: previous 1.3: preferred, colored
Changes since revision 1.3: +1 -2
lines
biology: Remove SHA1 hashes for distfiles
Revision 1.3: download - view: text, markup, annotated - select for diffs
Mon Nov 2 18:42:22 2015 UTC (9 years, 1 month ago) by agc
Branches: MAIN
CVS tags: pkgsrc-2021Q3-base,
pkgsrc-2021Q3,
pkgsrc-2021Q2-base,
pkgsrc-2021Q2,
pkgsrc-2021Q1-base,
pkgsrc-2021Q1,
pkgsrc-2020Q4-base,
pkgsrc-2020Q4,
pkgsrc-2020Q3-base,
pkgsrc-2020Q3,
pkgsrc-2020Q2-base,
pkgsrc-2020Q2,
pkgsrc-2020Q1-base,
pkgsrc-2020Q1,
pkgsrc-2019Q4-base,
pkgsrc-2019Q4,
pkgsrc-2019Q3-base,
pkgsrc-2019Q3,
pkgsrc-2019Q2-base,
pkgsrc-2019Q2,
pkgsrc-2019Q1-base,
pkgsrc-2019Q1,
pkgsrc-2018Q4-base,
pkgsrc-2018Q4,
pkgsrc-2018Q3-base,
pkgsrc-2018Q3,
pkgsrc-2018Q2-base,
pkgsrc-2018Q2,
pkgsrc-2018Q1-base,
pkgsrc-2018Q1,
pkgsrc-2017Q4-base,
pkgsrc-2017Q4,
pkgsrc-2017Q3-base,
pkgsrc-2017Q3,
pkgsrc-2017Q2-base,
pkgsrc-2017Q2,
pkgsrc-2017Q1-base,
pkgsrc-2017Q1,
pkgsrc-2016Q4-base,
pkgsrc-2016Q4,
pkgsrc-2016Q3-base,
pkgsrc-2016Q3,
pkgsrc-2016Q2-base,
pkgsrc-2016Q2,
pkgsrc-2016Q1-base,
pkgsrc-2016Q1,
pkgsrc-2015Q4-base,
pkgsrc-2015Q4
Diff to: previous 1.2: preferred, colored
Changes since revision 1.2: +2 -1
lines
Add SHA512 digests for distfiles for biology category.
Existing SHA1 digests verified, all found to be the same on the
machine holding the existing distfiles (morden). Existing SHA1
digests retained for now as an audit trail.
Revision 1.2: download - view: text, markup, annotated - select for diffs
Fri Nov 16 00:32:07 2012 UTC (12 years ago) by joerg
Branches: MAIN
CVS tags: pkgsrc-2015Q3-base,
pkgsrc-2015Q3,
pkgsrc-2015Q2-base,
pkgsrc-2015Q2,
pkgsrc-2015Q1-base,
pkgsrc-2015Q1,
pkgsrc-2014Q4-base,
pkgsrc-2014Q4,
pkgsrc-2014Q3-base,
pkgsrc-2014Q3,
pkgsrc-2014Q2-base,
pkgsrc-2014Q2,
pkgsrc-2014Q1-base,
pkgsrc-2014Q1,
pkgsrc-2013Q4-base,
pkgsrc-2013Q4,
pkgsrc-2013Q3-base,
pkgsrc-2013Q3,
pkgsrc-2013Q2-base,
pkgsrc-2013Q2,
pkgsrc-2013Q1-base,
pkgsrc-2013Q1,
pkgsrc-2012Q4-base,
pkgsrc-2012Q4
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +4 -1
lines
Don't redefine local variables.
Revision 1.1.1.1 (vendor branch): download - view: text, markup, annotated - select for diffs
Fri Sep 14 17:46:23 2012 UTC (12 years, 2 months ago) by asau
Branches: TNF
CVS tags: pkgsrc-base,
pkgsrc-2012Q3-base,
pkgsrc-2012Q3
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +0 -0
lines
Import PLINK 1.07 as biology/plink
From Jason Bacon via pkgsrc-wip.
PLINK is a free, open-source whole genome association analysis
toolset, designed to perform a range of basic, large-scale
analyses in a computationally efficient manner.
The focus of PLINK is purely on analysis of genotype/phenotype
data, so there is no support for steps prior to this (e.g. study
design and planning, generating genotype or CNV calls from raw
data). Through integration with gPLINK and Haploview, there is
some support for the subsequent visualization, annotation and
storage of results.
Revision 1.1: download - view: text, markup, annotated - select for diffs
Fri Sep 14 17:46:23 2012 UTC (12 years, 2 months ago) by asau
Branches: MAIN
Initial revision
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