CVS log for pkgsrc/biology/ncbi-blast+/distinfo
![[BACK]](/icons/back.gif)
Up to [cvs.NetBSD.org] / pkgsrc / biology / ncbi-blast+
Request diff between arbitrary revisions
Keyword substitution: kv
Default branch: MAIN
Revision 1.9: download - view: text, markup, annotated - select for diffs
Thu Sep 14 00:39:17 2023 UTC (14 months, 2 weeks ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2024Q3-base,
pkgsrc-2024Q3,
pkgsrc-2024Q2-base,
pkgsrc-2024Q2,
pkgsrc-2024Q1-base,
pkgsrc-2024Q1,
pkgsrc-2023Q4-base,
pkgsrc-2023Q4,
pkgsrc-2023Q3-base,
pkgsrc-2023Q3,
HEAD
Diff to: previous 1.8: preferred, colored
Changes since revision 1.8: +4 -4
lines
biology/ncbi-blast+: Update to 2.14.1
A few minor fixes and enhancements
Changes: https://www.ncbi.nlm.nih.gov/books/NBK131777/
Revision 1.8: download - view: text, markup, annotated - select for diffs
Sun May 28 22:48:27 2023 UTC (18 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2023Q2-base,
pkgsrc-2023Q2
Diff to: previous 1.7: preferred, colored
Changes since revision 1.7: +6 -4
lines
biology/ncbi-blast+: Update to 2.14.0
Several minor bug fixes, a few other enhancements
Also set only for 64-bit platforms (required for most bioinformatics)
Changes: https://www.ncbi.nlm.nih.gov/sites/books/NBK131777/
Revision 1.7: download - view: text, markup, annotated - select for diffs
Sun Apr 10 20:54:51 2022 UTC (2 years, 7 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2023Q1-base,
pkgsrc-2023Q1,
pkgsrc-2022Q4-base,
pkgsrc-2022Q4,
pkgsrc-2022Q3-base,
pkgsrc-2022Q3,
pkgsrc-2022Q2-base,
pkgsrc-2022Q2
Diff to: previous 1.6: preferred, colored
Changes since revision 1.6: +4 -4
lines
biology/ncbi-blast+: Update to 2.13.0
Several minor bug fixes and improvements since 2.11.0
Changes: https://www.ncbi.nlm.nih.gov/books/NBK131777/?report=reader
Revision 1.6: download - view: text, markup, annotated - select for diffs
Tue Oct 26 10:03:41 2021 UTC (3 years, 1 month ago) by nia
Branches: MAIN
CVS tags: pkgsrc-2022Q1-base,
pkgsrc-2022Q1,
pkgsrc-2021Q4-base,
pkgsrc-2021Q4
Diff to: previous 1.5: preferred, colored
Changes since revision 1.5: +2 -2
lines
biology: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and
SHA512 hashes
Revision 1.5: download - view: text, markup, annotated - select for diffs
Thu Oct 7 13:19:41 2021 UTC (3 years, 1 month ago) by nia
Branches: MAIN
Diff to: previous 1.4: preferred, colored
Changes since revision 1.4: +1 -2
lines
biology: Remove SHA1 hashes for distfiles
Revision 1.4: download - view: text, markup, annotated - select for diffs
Fri Jun 11 13:47:40 2021 UTC (3 years, 5 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2021Q3-base,
pkgsrc-2021Q3,
pkgsrc-2021Q2-base,
pkgsrc-2021Q2
Diff to: previous 1.3: preferred, colored
Changes since revision 1.3: +6 -7
lines
biology/ncbi-blast+: Update to 2.11.0
Release notes: https://www.ncbi.nlm.nih.gov/books/NBK131777/
Revision 1.3: download - view: text, markup, annotated - select for diffs
Mon Jan 7 15:00:10 2019 UTC (5 years, 10 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2021Q1-base,
pkgsrc-2021Q1,
pkgsrc-2020Q4-base,
pkgsrc-2020Q4,
pkgsrc-2020Q3-base,
pkgsrc-2020Q3,
pkgsrc-2020Q2-base,
pkgsrc-2020Q2,
pkgsrc-2020Q1-base,
pkgsrc-2020Q1,
pkgsrc-2019Q4-base,
pkgsrc-2019Q4,
pkgsrc-2019Q3-base,
pkgsrc-2019Q3,
pkgsrc-2019Q2-base,
pkgsrc-2019Q2,
pkgsrc-2019Q1-base,
pkgsrc-2019Q1
Diff to: previous 1.2: preferred, colored
Changes since revision 1.2: +8 -6
lines
ncbi-blast+: Upgrade to 2.8.1
Support for new BLAST database format
Increased makeblastdb output file size limit to 4GB
Other minor bug fixes and enhancements
OK wiz@
Revision 1.2: download - view: text, markup, annotated - select for diffs
Tue May 22 21:37:29 2018 UTC (6 years, 6 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2018Q4-base,
pkgsrc-2018Q4,
pkgsrc-2018Q3-base,
pkgsrc-2018Q3,
pkgsrc-2018Q2-base,
pkgsrc-2018Q2
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +2 -2
lines
biology/ncbi-blast+: Respect env to support PKGSRC_USE_RELRO
Fix a previous patch that hard-coded relro support by patching in pkgsrc
CFLAGS, CXXFLAGS, and LDFLAGS instead.
OK wiz@
Revision 1.1: download - view: text, markup, annotated - select for diffs
Fri Apr 27 20:28:28 2018 UTC (6 years, 7 months ago) by bacon
Branches: MAIN
biology/ncbi-blast+: import ncbi-blast+-2.7.1
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity
between sequences. The program compares nucleotide or protein sequences to
sequence databases and calculates the statistical significance of matches.
BLAST can be used to infer functional and evolutionary relationships between
sequences as well as help identify members of gene families.
OK wiz@
CVSweb <webmaster@jp.NetBSD.org>