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File: [cvs.NetBSD.org] / pkgsrc / biology / mummer / PLIST (download)

Revision 1.5, Thu Jan 18 19:13:10 2007 UTC (17 years, 3 months ago) by rillig
Branch: MAIN
CVS Tags: pkgsrc-2008Q3-base, pkgsrc-2008Q3, pkgsrc-2008Q2-base, pkgsrc-2008Q2, pkgsrc-2008Q1-base, pkgsrc-2008Q1, pkgsrc-2007Q4-base, pkgsrc-2007Q4, pkgsrc-2007Q3-base, pkgsrc-2007Q3, pkgsrc-2007Q2-base, pkgsrc-2007Q2, pkgsrc-2007Q1-base, pkgsrc-2007Q1, cwrapper, cube-native-xorg-base, cube-native-xorg
Changes since 1.4: +73 -68 lines

Updated mummer to 3.19.

Changes since 3.18:
- More documentation.

@comment $NetBSD: PLIST,v 1.5 2007/01/18 19:13:10 rillig Exp $
bin/annotate
bin/combineMUMs
bin/delta-filter
bin/gaps
bin/mgaps
bin/mummer
bin/postnuc
bin/postpro
bin/prenuc
bin/prepro
bin/repeat-match
bin/show-aligns
bin/show-coords
bin/show-snps
bin/show-tiling
share/doc/mummer/README
share/doc/mummer/differences.README
share/doc/mummer/mapview.README
share/doc/mummer/maxmat3man.tex
share/doc/mummer/maxmat3src.pdf
share/doc/mummer/nucmer.README
share/doc/mummer/optionman.sty
share/doc/mummer/promer.README
share/doc/mummer/run-mummer1.README
share/doc/mummer/run-mummer3.README
share/doc/mummer/skaff.sty
share/doc/mummer/web/MUMmer.pdf
share/doc/mummer/web/MUMmer2.pdf
share/doc/mummer/web/MUMmer3.pdf
share/doc/mummer/web/XFiles.pdf
share/doc/mummer/web/applications.html
share/doc/mummer/web/compare.html
share/doc/mummer/web/examples/data/B_anthracis_Mslice.fasta
share/doc/mummer/web/examples/data/B_anthracis_contigs.fasta
share/doc/mummer/web/examples/data/D_melanogaster_2Rslice.cds
share/doc/mummer/web/examples/data/D_melanogaster_2Rslice.fasta
share/doc/mummer/web/examples/data/D_melanogaster_2Rslice.utr
share/doc/mummer/web/examples/data/D_pseudoobscura_contigs.fasta
share/doc/mummer/web/examples/data/H_pylori26695_Bslice.fasta
share/doc/mummer/web/examples/data/H_pylori26695_Eslice.fasta
share/doc/mummer/web/examples/data/H_pyloriJ99_Bslice.fasta
share/doc/mummer/web/examples/data/H_pyloriJ99_Eslice.fasta
share/doc/mummer/web/examples/data/README
share/doc/mummer/web/examples/data/mapview_0.fig
share/doc/mummer/web/examples/data/mapview_0.pdf
share/doc/mummer/web/examples/data/mummer.fplot
share/doc/mummer/web/examples/data/mummer.gp
share/doc/mummer/web/examples/data/mummer.mums
share/doc/mummer/web/examples/data/mummer.ps
share/doc/mummer/web/examples/data/mummer.rplot
share/doc/mummer/web/examples/data/mummer1.align
share/doc/mummer/web/examples/data/mummer1.errorsgaps
share/doc/mummer/web/examples/data/mummer1.gaps
share/doc/mummer/web/examples/data/mummer1.out
share/doc/mummer/web/examples/data/mummer3.align
share/doc/mummer/web/examples/data/mummer3.errorsgaps
share/doc/mummer/web/examples/data/mummer3.gaps
share/doc/mummer/web/examples/data/mummer3.out
share/doc/mummer/web/examples/data/nucmer.cluster
share/doc/mummer/web/examples/data/nucmer.coords
share/doc/mummer/web/examples/data/nucmer.delta
share/doc/mummer/web/examples/data/nucmer.snps
share/doc/mummer/web/examples/data/nucmer.tiling
share/doc/mummer/web/examples/data/promer.aligns
share/doc/mummer/web/examples/data/promer.cluster
share/doc/mummer/web/examples/data/promer.coords
share/doc/mummer/web/examples/data/promer.delta
share/doc/mummer/web/examples/dotplot.gif
share/doc/mummer/web/examples/examples_logo.gif
share/doc/mummer/web/examples/index.html
share/doc/mummer/web/examples/mapplot.gif
share/doc/mummer/web/examples/mapview_fig.jpg
share/doc/mummer/web/examples/mummer_ps.jpg
share/doc/mummer/web/index.html
share/doc/mummer/web/logo.gif
share/doc/mummer/web/manual/AlignmentTypes.odg
share/doc/mummer/web/manual/AlignmentTypes.pdf
share/doc/mummer/web/manual/covplot.gif
share/doc/mummer/web/manual/dotplot.gif
share/doc/mummer/web/manual/gaps.gif
share/doc/mummer/web/manual/index.html
share/doc/mummer/web/manual/manual_logo.gif
share/doc/mummer/web/manual/mapplot.gif
share/doc/mummer/web/manual/mgaps.gif
share/doc/mummer/web/manual/multiplota.gif
share/doc/mummer/web/manual/multiplotb.gif
share/doc/mummer/web/manual/nuc_proex.gif
share/doc/mummer/web/manual/nucex.gif
share/doc/mummer/web/manual/osi.gif
share/doc/mummer/web/manual/pro_proex.gif
share/doc/mummer/web/mummer-help.gif
share/doc/mummer/web/mummer-users.gif
share/mummer/exact-tandems
share/mummer/mapview
share/mummer/mummerplot
share/mummer/nucmer
share/mummer/nucmer2xfig
share/mummer/promer
share/mummer/run-mummer1
share/mummer/run-mummer3
@dirrm share/mummer
@dirrm share/doc/mummer/web/manual
@dirrm share/doc/mummer/web/examples/data
@dirrm share/doc/mummer/web/examples
@dirrm share/doc/mummer/web
@dirrm share/doc/mummer