CVS log for pkgsrc/biology/hisat2/distinfo
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Default branch: MAIN
Revision 1.5: download - view: text, markup, annotated - select for diffs
Wed May 17 21:55:34 2023 UTC (18 months, 3 weeks ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2024Q3-base,
pkgsrc-2024Q3,
pkgsrc-2024Q2-base,
pkgsrc-2024Q2,
pkgsrc-2024Q1-base,
pkgsrc-2024Q1,
pkgsrc-2023Q4-base,
pkgsrc-2023Q4,
pkgsrc-2023Q3-base,
pkgsrc-2023Q3,
pkgsrc-2023Q2-base,
pkgsrc-2023Q2,
HEAD
Diff to: previous 1.4: preferred, colored
Changes since revision 1.4: +2 -0
lines
biology/hisat2: Add SIMDE support
SIMDE enables SSE and other x86 intrinsics on other architectures
Tested on ARM64, may work on other 64-bit platforms
Revision 1.4: download - view: text, markup, annotated - select for diffs
Thu Mar 17 16:01:11 2022 UTC (2 years, 8 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2023Q1-base,
pkgsrc-2023Q1,
pkgsrc-2022Q4-base,
pkgsrc-2022Q4,
pkgsrc-2022Q3-base,
pkgsrc-2022Q3,
pkgsrc-2022Q2-base,
pkgsrc-2022Q2,
pkgsrc-2022Q1-base,
pkgsrc-2022Q1
Diff to: previous 1.3: preferred, colored
Changes since revision 1.3: +7 -5
lines
biology/hisat2: Update to 2.2.1
pkgsrc fix: Unbreak build on Darwin
Add python3 support
Several bug fixes and enhancements
Changes: https://github.com/DaehwanKimLab/hisat2/tags
Revision 1.3: download - view: text, markup, annotated - select for diffs
Tue Oct 26 10:03:40 2021 UTC (3 years, 1 month ago) by nia
Branches: MAIN
CVS tags: pkgsrc-2021Q4-base,
pkgsrc-2021Q4
Diff to: previous 1.2: preferred, colored
Changes since revision 1.2: +2 -2
lines
biology: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and
SHA512 hashes
Revision 1.2: download - view: text, markup, annotated - select for diffs
Thu Oct 7 13:19:39 2021 UTC (3 years, 2 months ago) by nia
Branches: MAIN
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +1 -2
lines
biology: Remove SHA1 hashes for distfiles
Revision 1.1: download - view: text, markup, annotated - select for diffs
Tue Jan 15 01:26:29 2019 UTC (5 years, 10 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2021Q3-base,
pkgsrc-2021Q3,
pkgsrc-2021Q2-base,
pkgsrc-2021Q2,
pkgsrc-2021Q1-base,
pkgsrc-2021Q1,
pkgsrc-2020Q4-base,
pkgsrc-2020Q4,
pkgsrc-2020Q3-base,
pkgsrc-2020Q3,
pkgsrc-2020Q2-base,
pkgsrc-2020Q2,
pkgsrc-2020Q1-base,
pkgsrc-2020Q1,
pkgsrc-2019Q4-base,
pkgsrc-2019Q4,
pkgsrc-2019Q3-base,
pkgsrc-2019Q3,
pkgsrc-2019Q2-base,
pkgsrc-2019Q2,
pkgsrc-2019Q1-base,
pkgsrc-2019Q1
biology/hisat2: import hisat2-2.1.0.23
HISAT2 is a fast and sensitive alignment program for mapping next-generation
sequencing reads (both DNA and RNA) to a population of human genomes (as well
as to a single reference genome).
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