The NetBSD Project

CVS log for pkgsrc/biology/hisat2/Makefile

[BACK] Up to [cvs.NetBSD.org] / pkgsrc / biology / hisat2

Request diff between arbitrary revisions


Default branch: MAIN


Revision 1.12 / (download) - annotate - [select for diffs], Mon Aug 14 05:23:51 2023 UTC (6 months, 2 weeks ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2023Q4-base, pkgsrc-2023Q4, pkgsrc-2023Q3-base, pkgsrc-2023Q3, HEAD
Changes since 1.11: +2 -2 lines
Diff to previous 1.11 (colored)

*: recursive bump for Python 3.11 as new default

Revision 1.11 / (download) - annotate - [select for diffs], Wed May 17 21:55:34 2023 UTC (9 months, 2 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2023Q2-base, pkgsrc-2023Q2
Changes since 1.10: +4 -3 lines
Diff to previous 1.10 (colored)

biology/hisat2: Add SIMDE support

SIMDE enables SSE and other x86 intrinsics on other architectures
Tested on ARM64, may work on other 64-bit platforms

Revision 1.10 / (download) - annotate - [select for diffs], Wed Dec 28 15:27:16 2022 UTC (14 months ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2023Q1-base, pkgsrc-2023Q1
Changes since 1.9: +2 -2 lines
Diff to previous 1.9 (colored)

Change MAINTAINER= to OWNER= on mission-critical packages

Revision 1.9 / (download) - annotate - [select for diffs], Thu Jun 30 11:18:04 2022 UTC (20 months ago) by nia
Branch: MAIN
CVS Tags: pkgsrc-2022Q4-base, pkgsrc-2022Q4, pkgsrc-2022Q3-base, pkgsrc-2022Q3
Changes since 1.8: +2 -2 lines
Diff to previous 1.8 (colored)

*: Revbump packages that use Python at runtime without a PKGNAME prefix

Revision 1.8 / (download) - annotate - [select for diffs], Tue Jun 28 11:31:00 2022 UTC (20 months ago) by wiz
Branch: MAIN
Changes since 1.7: +2 -1 lines
Diff to previous 1.7 (colored)

*: recursive bump for perl 5.36

Revision 1.7 / (download) - annotate - [select for diffs], Thu Mar 17 16:01:11 2022 UTC (23 months, 2 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2022Q2-base, pkgsrc-2022Q2, pkgsrc-2022Q1-base, pkgsrc-2022Q1
Changes since 1.6: +12 -10 lines
Diff to previous 1.6 (colored)

biology/hisat2: Update to 2.2.1

pkgsrc fix: Unbreak build on Darwin

Add python3 support
Several bug fixes and enhancements
Changes: https://github.com/DaehwanKimLab/hisat2/tags

Revision 1.6 / (download) - annotate - [select for diffs], Mon May 24 19:49:11 2021 UTC (2 years, 9 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2021Q4-base, pkgsrc-2021Q4, pkgsrc-2021Q3-base, pkgsrc-2021Q3, pkgsrc-2021Q2-base, pkgsrc-2021Q2
Changes since 1.5: +2 -2 lines
Diff to previous 1.5 (colored)

*: recursive bump for perl 5.34

Revision 1.5 / (download) - annotate - [select for diffs], Fri Dec 4 20:45:00 2020 UTC (3 years, 2 months ago) by nia
Branch: MAIN
CVS Tags: pkgsrc-2021Q1-base, pkgsrc-2021Q1, pkgsrc-2020Q4-base, pkgsrc-2020Q4
Changes since 1.4: +2 -2 lines
Diff to previous 1.4 (colored)

Revbump packages with a runtime Python dep but no version prefix.

For the Python 3.8 default switch.

Revision 1.4 / (download) - annotate - [select for diffs], Mon Aug 31 18:06:39 2020 UTC (3 years, 6 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2020Q3-base, pkgsrc-2020Q3
Changes since 1.3: +2 -2 lines
Diff to previous 1.3 (colored)

*: bump PKGREVISION for perl-5.32.

Revision 1.3 / (download) - annotate - [select for diffs], Sun Aug 11 13:18:00 2019 UTC (4 years, 6 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2020Q2-base, pkgsrc-2020Q2, pkgsrc-2020Q1-base, pkgsrc-2020Q1, pkgsrc-2019Q4-base, pkgsrc-2019Q4, pkgsrc-2019Q3-base, pkgsrc-2019Q3
Changes since 1.2: +2 -2 lines
Diff to previous 1.2 (colored)

Bump PKGREVISIONs for perl 5.30.0

Revision 1.2 / (download) - annotate - [select for diffs], Thu Apr 25 07:32:37 2019 UTC (4 years, 10 months ago) by maya
Branch: MAIN
CVS Tags: pkgsrc-2019Q2-base, pkgsrc-2019Q2
Changes since 1.1: +2 -1 lines
Diff to previous 1.1 (colored)

PKGREVISION bump for anything using python without a PYPKGPREFIX.

This is a semi-manual PKGREVISION bump.

Revision 1.1 / (download) - annotate - [select for diffs], Tue Jan 15 01:26:29 2019 UTC (5 years, 1 month ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2019Q1-base, pkgsrc-2019Q1

biology/hisat2: import hisat2-2.1.0.23

HISAT2 is a fast and sensitive alignment program for mapping next-generation
sequencing reads (both DNA and RNA) to a population of human genomes (as well
as to a single reference genome).

This form allows you to request diff's between any two revisions of a file. You may select a symbolic revision name using the selection box or you may type in a numeric name using the type-in text box.




CVSweb <webmaster@jp.NetBSD.org>