CVS log for pkgsrc/biology/hisat2/Makefile
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Keyword substitution: kv
Default branch: MAIN
Revision 1.12: download - view: text, markup, annotated - select for diffs
Mon Aug 14 05:23:51 2023 UTC (15 months, 3 weeks ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2024Q3-base,
pkgsrc-2024Q3,
pkgsrc-2024Q2-base,
pkgsrc-2024Q2,
pkgsrc-2024Q1-base,
pkgsrc-2024Q1,
pkgsrc-2023Q4-base,
pkgsrc-2023Q4,
pkgsrc-2023Q3-base,
pkgsrc-2023Q3,
HEAD
Diff to: previous 1.11: preferred, colored
Changes since revision 1.11: +2 -2
lines
*: recursive bump for Python 3.11 as new default
Revision 1.11: download - view: text, markup, annotated - select for diffs
Wed May 17 21:55:34 2023 UTC (18 months, 3 weeks ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2023Q2-base,
pkgsrc-2023Q2
Diff to: previous 1.10: preferred, colored
Changes since revision 1.10: +4 -3
lines
biology/hisat2: Add SIMDE support
SIMDE enables SSE and other x86 intrinsics on other architectures
Tested on ARM64, may work on other 64-bit platforms
Revision 1.10: download - view: text, markup, annotated - select for diffs
Wed Dec 28 15:27:16 2022 UTC (23 months, 1 week ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2023Q1-base,
pkgsrc-2023Q1
Diff to: previous 1.9: preferred, colored
Changes since revision 1.9: +2 -2
lines
Change MAINTAINER= to OWNER= on mission-critical packages
Revision 1.9: download - view: text, markup, annotated - select for diffs
Thu Jun 30 11:18:04 2022 UTC (2 years, 5 months ago) by nia
Branches: MAIN
CVS tags: pkgsrc-2022Q4-base,
pkgsrc-2022Q4,
pkgsrc-2022Q3-base,
pkgsrc-2022Q3
Diff to: previous 1.8: preferred, colored
Changes since revision 1.8: +2 -2
lines
*: Revbump packages that use Python at runtime without a PKGNAME prefix
Revision 1.8: download - view: text, markup, annotated - select for diffs
Tue Jun 28 11:31:00 2022 UTC (2 years, 5 months ago) by wiz
Branches: MAIN
Diff to: previous 1.7: preferred, colored
Changes since revision 1.7: +2 -1
lines
*: recursive bump for perl 5.36
Revision 1.7: download - view: text, markup, annotated - select for diffs
Thu Mar 17 16:01:11 2022 UTC (2 years, 8 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2022Q2-base,
pkgsrc-2022Q2,
pkgsrc-2022Q1-base,
pkgsrc-2022Q1
Diff to: previous 1.6: preferred, colored
Changes since revision 1.6: +12 -10
lines
biology/hisat2: Update to 2.2.1
pkgsrc fix: Unbreak build on Darwin
Add python3 support
Several bug fixes and enhancements
Changes: https://github.com/DaehwanKimLab/hisat2/tags
Revision 1.6: download - view: text, markup, annotated - select for diffs
Mon May 24 19:49:11 2021 UTC (3 years, 6 months ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2021Q4-base,
pkgsrc-2021Q4,
pkgsrc-2021Q3-base,
pkgsrc-2021Q3,
pkgsrc-2021Q2-base,
pkgsrc-2021Q2
Diff to: previous 1.5: preferred, colored
Changes since revision 1.5: +2 -2
lines
*: recursive bump for perl 5.34
Revision 1.5: download - view: text, markup, annotated - select for diffs
Fri Dec 4 20:45:00 2020 UTC (4 years ago) by nia
Branches: MAIN
CVS tags: pkgsrc-2021Q1-base,
pkgsrc-2021Q1,
pkgsrc-2020Q4-base,
pkgsrc-2020Q4
Diff to: previous 1.4: preferred, colored
Changes since revision 1.4: +2 -2
lines
Revbump packages with a runtime Python dep but no version prefix.
For the Python 3.8 default switch.
Revision 1.4: download - view: text, markup, annotated - select for diffs
Mon Aug 31 18:06:39 2020 UTC (4 years, 3 months ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2020Q3-base,
pkgsrc-2020Q3
Diff to: previous 1.3: preferred, colored
Changes since revision 1.3: +2 -2
lines
*: bump PKGREVISION for perl-5.32.
Revision 1.3: download - view: text, markup, annotated - select for diffs
Sun Aug 11 13:18:00 2019 UTC (5 years, 4 months ago) by wiz
Branches: MAIN
CVS tags: pkgsrc-2020Q2-base,
pkgsrc-2020Q2,
pkgsrc-2020Q1-base,
pkgsrc-2020Q1,
pkgsrc-2019Q4-base,
pkgsrc-2019Q4,
pkgsrc-2019Q3-base,
pkgsrc-2019Q3
Diff to: previous 1.2: preferred, colored
Changes since revision 1.2: +2 -2
lines
Bump PKGREVISIONs for perl 5.30.0
Revision 1.2: download - view: text, markup, annotated - select for diffs
Thu Apr 25 07:32:37 2019 UTC (5 years, 7 months ago) by maya
Branches: MAIN
CVS tags: pkgsrc-2019Q2-base,
pkgsrc-2019Q2
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +2 -1
lines
PKGREVISION bump for anything using python without a PYPKGPREFIX.
This is a semi-manual PKGREVISION bump.
Revision 1.1: download - view: text, markup, annotated - select for diffs
Tue Jan 15 01:26:29 2019 UTC (5 years, 10 months ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2019Q1-base,
pkgsrc-2019Q1
biology/hisat2: import hisat2-2.1.0.23
HISAT2 is a fast and sensitive alignment program for mapping next-generation
sequencing reads (both DNA and RNA) to a population of human genomes (as well
as to a single reference genome).
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