Up to [cvs.NetBSD.org] / pkgsrc / biology / gabedit
Request diff between arbitrary revisions
Default branch: MAIN
Revision 1.23 / (download) - annotate - [select for diffs], Tue Nov 14 14:01:27 2023 UTC (3 weeks, 6 days ago) by wiz
Branch: MAIN
CVS Tags: HEAD
Changes since 1.22: +2 -2
lines
Diff to previous 1.22 (colored)
*: recursive bump for cairo dependency changes
Revision 1.22 / (download) - annotate - [select for diffs], Sun Nov 12 13:20:45 2023 UTC (4 weeks, 1 day ago) by wiz
Branch: MAIN
Changes since 1.21: +2 -2
lines
Diff to previous 1.21 (colored)
*: revebump for new brotli option for freetype2 Addresses PR 57693
Revision 1.21 / (download) - annotate - [select for diffs], Sat Oct 21 17:09:48 2023 UTC (7 weeks, 2 days ago) by gdt
Branch: MAIN
Changes since 1.20: +2 -2
lines
Diff to previous 1.20 (colored)
recursive revbump for tiff update
Revision 1.20 / (download) - annotate - [select for diffs], Sun Jan 29 21:15:33 2023 UTC (10 months, 1 week ago) by ryoon
Branch: MAIN
CVS Tags: pkgsrc-2023Q3-base,
pkgsrc-2023Q3,
pkgsrc-2023Q2-base,
pkgsrc-2023Q2,
pkgsrc-2023Q1-base,
pkgsrc-2023Q1
Changes since 1.19: +2 -2
lines
Diff to previous 1.19 (colored)
*: Recursive revbup from graphics/freetype2
Revision 1.19 / (download) - annotate - [select for diffs], Tue Jan 3 17:36:48 2023 UTC (11 months, 1 week ago) by wiz
Branch: MAIN
Changes since 1.18: +2 -2
lines
Diff to previous 1.18 (colored)
*: recursive bump for tiff shlib major bump
Revision 1.18 / (download) - annotate - [select for diffs], Wed Dec 8 16:03:23 2021 UTC (2 years ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2022Q4-base,
pkgsrc-2022Q4,
pkgsrc-2022Q3-base,
pkgsrc-2022Q3,
pkgsrc-2022Q2-base,
pkgsrc-2022Q2,
pkgsrc-2022Q1-base,
pkgsrc-2022Q1,
pkgsrc-2021Q4-base,
pkgsrc-2021Q4
Changes since 1.17: +2 -2
lines
Diff to previous 1.17 (colored)
revbump for icu and libffi
Revision 1.17 / (download) - annotate - [select for diffs], Mon Aug 17 20:18:13 2020 UTC (3 years, 3 months ago) by leot
Branch: MAIN
CVS Tags: pkgsrc-2021Q3-base,
pkgsrc-2021Q3,
pkgsrc-2021Q2-base,
pkgsrc-2021Q2,
pkgsrc-2021Q1-base,
pkgsrc-2021Q1,
pkgsrc-2020Q4-base,
pkgsrc-2020Q4,
pkgsrc-2020Q3-base,
pkgsrc-2020Q3
Changes since 1.16: +2 -2
lines
Diff to previous 1.16 (colored)
*: revbump after fontconfig bl3 changes (libuuid removal)
Revision 1.16 / (download) - annotate - [select for diffs], Tue Mar 10 22:09:26 2020 UTC (3 years, 9 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2020Q2-base,
pkgsrc-2020Q2,
pkgsrc-2020Q1-base,
pkgsrc-2020Q1
Changes since 1.15: +2 -2
lines
Diff to previous 1.15 (colored)
librsvg: update bl3.mk to remove libcroco in rust case recursive bump for the dependency change
Revision 1.15 / (download) - annotate - [select for diffs], Sun Mar 8 16:48:52 2020 UTC (3 years, 9 months ago) by wiz
Branch: MAIN
Changes since 1.14: +2 -2
lines
Diff to previous 1.14 (colored)
*: recursive bump for libffi
Revision 1.14 / (download) - annotate - [select for diffs], Sun Jan 26 05:26:15 2020 UTC (3 years, 10 months ago) by rillig
Branch: MAIN
Changes since 1.13: +2 -2
lines
Diff to previous 1.13 (colored)
all: migrate some SourceForge homepage URLs back from https to http https://mail-index.netbsd.org/pkgsrc-changes/2020/01/18/msg205146.html In the above commit, the homepage URLs were migrated from http to https, assuming that SourceForge would use the same host names for both http and https connections. This assumption was wrong. Their documentation at https://sourceforge.net/p/forge/documentation/Custom%20VHOSTs/ states that the https URLs use the domain sourceforge.io instead. To make the homepages from the above commit reachable again, pkglint has been extended to check for reachable homepages. This check is only enabled when the --network command line option is given. Each of the homepages that referred to https://$project.sourceforge.net before was migrated to https://$project.sourceforge.io (27), and if that was not reachable, to the fallback URL http://$project.sourceforge.net (163).
Revision 1.13 / (download) - annotate - [select for diffs], Sat Jan 18 23:30:09 2020 UTC (3 years, 10 months ago) by rillig
Branch: MAIN
Changes since 1.12: +2 -2
lines
Diff to previous 1.12 (colored)
all: migrate several HOMEPAGEs to https pkglint --only "https instead of http" -r -F With manual adjustments afterwards since pkglint 19.4.4 fixed a few indentations in unrelated lines. This mainly affects projects hosted at SourceForce, as well as freedesktop.org, CTAN and GNU.
Revision 1.12 / (download) - annotate - [select for diffs], Sun Jul 21 22:24:29 2019 UTC (4 years, 4 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2019Q4-base,
pkgsrc-2019Q4,
pkgsrc-2019Q3-base,
pkgsrc-2019Q3
Changes since 1.11: +2 -2
lines
Diff to previous 1.11 (colored)
*: recursive bump for gdk-pixbuf2-2.38.1
Revision 1.11 / (download) - annotate - [select for diffs], Wed Nov 14 22:21:06 2018 UTC (5 years ago) by kleink
Branch: MAIN
CVS Tags: pkgsrc-2019Q2-base,
pkgsrc-2019Q2,
pkgsrc-2019Q1-base,
pkgsrc-2019Q1,
pkgsrc-2018Q4-base,
pkgsrc-2018Q4
Changes since 1.10: +2 -2
lines
Diff to previous 1.10 (colored)
Revbump after cairo 1.16.0 update.
Revision 1.10 / (download) - annotate - [select for diffs], Mon Nov 12 03:51:45 2018 UTC (5 years, 1 month ago) by ryoon
Branch: MAIN
Changes since 1.9: +2 -2
lines
Diff to previous 1.9 (colored)
Recursive revbump from hardbuzz-2.1.1
Revision 1.9 / (download) - annotate - [select for diffs], Mon Apr 16 14:34:10 2018 UTC (5 years, 7 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2018Q3-base,
pkgsrc-2018Q3,
pkgsrc-2018Q2-base,
pkgsrc-2018Q2
Changes since 1.8: +2 -2
lines
Diff to previous 1.8 (colored)
Recursive bump for new fribidi dependency in pango.
Revision 1.8 / (download) - annotate - [select for diffs], Mon Mar 12 11:16:07 2018 UTC (5 years, 9 months ago) by wiz
Branch: MAIN
CVS Tags: pkgsrc-2018Q1-base,
pkgsrc-2018Q1
Changes since 1.7: +2 -2
lines
Diff to previous 1.7 (colored)
Recursive bumps for fontconfig and libzip dependency changes.
Revision 1.7 / (download) - annotate - [select for diffs], Mon Jan 1 01:15:25 2018 UTC (5 years, 11 months ago) by rillig
Branch: MAIN
Changes since 1.6: +5 -5
lines
Diff to previous 1.6 (colored)
Cleanup: replace curly braces with parentheses.
Revision 1.6 / (download) - annotate - [select for diffs], Sun Feb 12 06:25:06 2017 UTC (6 years, 9 months ago) by ryoon
Branch: MAIN
CVS Tags: pkgsrc-2017Q4-base,
pkgsrc-2017Q4,
pkgsrc-2017Q3-base,
pkgsrc-2017Q3,
pkgsrc-2017Q2-base,
pkgsrc-2017Q2,
pkgsrc-2017Q1-base,
pkgsrc-2017Q1
Changes since 1.5: +2 -2
lines
Diff to previous 1.5 (colored)
Recursive revbump from fonts/harfbuzz
Revision 1.5 / (download) - annotate - [select for diffs], Mon Feb 6 13:55:06 2017 UTC (6 years, 10 months ago) by wiz
Branch: MAIN
Changes since 1.4: +2 -2
lines
Diff to previous 1.4 (colored)
Recursive bump for harfbuzz's new graphite2 dependency.
Revision 1.4 / (download) - annotate - [select for diffs], Wed Aug 3 10:22:32 2016 UTC (7 years, 4 months ago) by adam
Branch: MAIN
CVS Tags: pkgsrc-2016Q4-base,
pkgsrc-2016Q4,
pkgsrc-2016Q3-base,
pkgsrc-2016Q3
Changes since 1.3: +2 -1
lines
Diff to previous 1.3 (colored)
Revbump after graphics/gd update
Revision 1.3 / (download) - annotate - [select for diffs], Sat Dec 12 17:26:05 2015 UTC (8 years ago) by wiedi
Branch: MAIN
CVS Tags: pkgsrc-2016Q2-base,
pkgsrc-2016Q2,
pkgsrc-2016Q1-base,
pkgsrc-2016Q1,
pkgsrc-2015Q4-base,
pkgsrc-2015Q4
Changes since 1.2: +3 -1
lines
Diff to previous 1.2 (colored)
Fix network libs on SunOS
Revision 1.2 / (download) - annotate - [select for diffs], Mon Jul 27 19:47:55 2015 UTC (8 years, 4 months ago) by asau
Branch: MAIN
CVS Tags: pkgsrc-2015Q3-base,
pkgsrc-2015Q3
Changes since 1.1: +5 -1
lines
Diff to previous 1.1 (colored)
Skip portability checks for sample scripts.
Revision 1.1.1.1 / (download) - annotate - [select for diffs] (vendor branch), Wed Jul 22 19:05:10 2015 UTC (8 years, 4 months ago) by asau
Branch: TNF
CVS Tags: pkgsrc-base
Changes since 1.1: +0 -0
lines
Diff to previous 1.1 (colored)
Import Gabedit 2.4.8 as biology/gabedit. Gabedit is a graphical user interface to computational chemistry packages like Gamess-US, Gaussian, Molcas, Molpro, MPQC, OpenMopac, Orca, PCGamess and Q-Chem. It can display a variety of calculation results including support for most major molecular file formats. The advanced "Molecule Builder" allows to rapidly sketch in molecules and examine them in 3D. Graphics can be exported to various formats, including animations. Major features * Gabedit can create input file for GAMESS(US), GAUSSIAN, MOLCAS, MOLPRO , MPQC, OpenMopac, Orca, PCGamess and Q-Chem. * Gabedit can graphically display a variety of Gamess-US, Gaussian, Molcas, Molpro, MPQC, OpenMopac, Orca, PCGamess, Q-Chem, (partially) ErgoSCF and (partially) ADF calculation results, including the following: + Molecular orbitals. + Surfaces from the electron density, electrostatic potential, NMR shielding density, and other properties. + Surfaces may be displayed in solid, translucent and wire mesh modes. they are can be colorcoded by a separate property. + Contours (colorcoded), Planes colorcoded, Dipole. XYZ axes and the principal axes of the molecule. + Animation of the normal modes corresponding to vibrational frequencies. + Animation of the rotation of geometry, surfaces, contours, planes colorcoded, xyz and the principal axes of the molecule. + Animation of contours, Animation of planes colorcoded. * Gabedit can display UV-Vis, IR and Raman computed spectra. * Gabedit can generate a povray file for geometry (including hydrogen's bond),surfaces (including colorcoded surfaces), contours, planes colorcoded. * Gabedit can save picture in BMP, JPEG, PNG, PPM and PS format. * Gabedit can generate automatically a series of pictures for animation (vibration, geometry convergence, rotation, contours, planes colorcoded). * Simulated Annealing with Molecular Dynamics is implemented in Gabedit (using Amber 99 molecular mechanics parameters).
Revision 1.1 / (download) - annotate - [select for diffs], Wed Jul 22 19:05:10 2015 UTC (8 years, 4 months ago) by asau
Branch: MAIN
Initial revision