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biology/fastx-toolkit: CLI tools for FASTA/FASTQ files preprocessing

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

# $NetBSD: Makefile,v 1.1 2022/04/05 18:48:57 bacon Exp $

DISTNAME=	fastx-toolkit-0.0.14.6
CATEGORIES=	biology
MASTER_SITES=	${MASTER_SITE_GITHUB:=agordon/}
GITHUB_PROJECT=	fastx_toolkit
GITHUB_TAG=	ea0ca83ba24dce80c20ca589b838a281fe5deb0c

MAINTAINER=	bacon@NetBSD.org
HOMEPAGE=	https://github.com/agordon/fastx_toolkit
COMMENT=	CLI tools for Short-Reads FASTA/FASTQ files preprocessing
LICENSE=	gnu-agpl-v3

USE_LANGUAGES=	c c++
USE_TOOLS+=	autoconf automake autoreconf bash pkg-config perl:run
USE_LIBTOOL=	yes
GNU_CONFIGURE=	yes
REPLACE_PERL+=	scripts/*.pl
REPLACE_BASH+=	scripts/fastq_quality_boxplot_graph.sh
REPLACE_BASH+=	scripts/fastx_nucleotide_distribution_graph.sh
REPLACE_BASH+=	scripts/fastx_nucleotide_distribution_line_graph.sh

pre-configure:
	${RUN} cd ${WRKSRC} && autoreconf -vif

.include "../../devel/libgtextutils/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"