# $NetBSD: Makefile,v 1.3 2023/08/01 23:20:37 wiz Exp $
DISTNAME= chip-seq-1.1
CATEGORIES= biology meta-pkgs
MASTER_SITES= # empty
OWNER= bacon@NetBSD.org
COMMENT= Core tools needed for ChIP-Seq analysis
DEPENDS+= fastq-trim>=0:../../biology/fastq-trim
DEPENDS+= fastqc>=0:../../biology/fastqc
DEPENDS+= biolibc-tools>=0:../../biology/biolibc-tools
DEPENDS+= gffread>=0:../../biology/gffread
DEPENDS+= bwa>=0:../../biology/bwa
DEPENDS+= bowtie2>=0:../../biology/bowtie2
DEPENDS+= samtools>=0:../../biology/samtools
DEPENDS+= igv>=0:../../biology/igv
DEPENDS+= ${PYPKGPREFIX}-macs2>=0:../../biology/py-macs2
DEPENDS+= fasda>=0:../../biology/fasda
DEPENDS+= peak-classifier>=0:../../biology/peak-classifier
DEPENDS+= webbrowser>=0:../../www/webbrowser
META_PACKAGE= yes
PYTHON_VERSIONS_INCOMPATIBLE= 27 38
.include "../../lang/python/application.mk"
.include "../../mk/bsd.pkg.mk"
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