CVS log for pkgsrc/biology/bwa/distinfo
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Keyword substitution: kv
Default branch: MAIN
Revision 1.9: download - view: text, markup, annotated - select for diffs
Thu May 18 14:05:15 2023 UTC (18 months, 3 weeks ago) by bacon
Branches: MAIN
CVS tags: pkgsrc-2024Q3-base,
pkgsrc-2024Q3,
pkgsrc-2024Q2-base,
pkgsrc-2024Q2,
pkgsrc-2024Q1-base,
pkgsrc-2024Q1,
pkgsrc-2023Q4-base,
pkgsrc-2023Q4,
pkgsrc-2023Q3-base,
pkgsrc-2023Q3,
pkgsrc-2023Q2-base,
pkgsrc-2023Q2,
HEAD
Diff to: previous 1.8: preferred, colored
Changes since revision 1.8: +4 -3
lines
biology/bwa: Add support for aarch64 via devel/simde
May also work on other 64-bit architectures, but untested
Revision 1.8: download - view: text, markup, annotated - select for diffs
Tue Oct 26 10:03:37 2021 UTC (3 years, 1 month ago) by nia
Branches: MAIN
CVS tags: pkgsrc-2023Q1-base,
pkgsrc-2023Q1,
pkgsrc-2022Q4-base,
pkgsrc-2022Q4,
pkgsrc-2022Q3-base,
pkgsrc-2022Q3,
pkgsrc-2022Q2-base,
pkgsrc-2022Q2,
pkgsrc-2022Q1-base,
pkgsrc-2022Q1,
pkgsrc-2021Q4-base,
pkgsrc-2021Q4
Diff to: previous 1.7: preferred, colored
Changes since revision 1.7: +2 -2
lines
biology: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and
SHA512 hashes
Revision 1.7: download - view: text, markup, annotated - select for diffs
Thu Oct 7 13:19:37 2021 UTC (3 years, 2 months ago) by nia
Branches: MAIN
Diff to: previous 1.6: preferred, colored
Changes since revision 1.6: +1 -2
lines
biology: Remove SHA1 hashes for distfiles
Revision 1.6: download - view: text, markup, annotated - select for diffs
Wed Dec 27 23:44:01 2017 UTC (6 years, 11 months ago) by he
Branches: MAIN
CVS tags: pkgsrc-2021Q3-base,
pkgsrc-2021Q3,
pkgsrc-2021Q2-base,
pkgsrc-2021Q2,
pkgsrc-2021Q1-base,
pkgsrc-2021Q1,
pkgsrc-2020Q4-base,
pkgsrc-2020Q4,
pkgsrc-2020Q3-base,
pkgsrc-2020Q3,
pkgsrc-2020Q2-base,
pkgsrc-2020Q2,
pkgsrc-2020Q1-base,
pkgsrc-2020Q1,
pkgsrc-2019Q4-base,
pkgsrc-2019Q4,
pkgsrc-2019Q3-base,
pkgsrc-2019Q3,
pkgsrc-2019Q2-base,
pkgsrc-2019Q2,
pkgsrc-2019Q1-base,
pkgsrc-2019Q1,
pkgsrc-2018Q4-base,
pkgsrc-2018Q4,
pkgsrc-2018Q3-base,
pkgsrc-2018Q3,
pkgsrc-2018Q2-base,
pkgsrc-2018Q2,
pkgsrc-2018Q1-base,
pkgsrc-2018Q1,
pkgsrc-2017Q4-base,
pkgsrc-2017Q4
Diff to: previous 1.5: preferred, colored
Changes since revision 1.5: +2 -1
lines
Re-add patch to bring timeval definition and select prototype into scope.
Bump PKGREVISION.
Revision 1.5: download - view: text, markup, annotated - select for diffs
Sun Dec 17 14:30:36 2017 UTC (6 years, 11 months ago) by bacon
Branches: MAIN
Diff to: previous 1.4: preferred, colored
Changes since revision 1.4: +6 -7
lines
biology/bwa: Update to 0.7.17
Numerous bug fixes, enhancements, and new command-line options
ok wiz@
Revision 1.4: download - view: text, markup, annotated - select for diffs
Tue Feb 14 21:34:34 2017 UTC (7 years, 9 months ago) by joerg
Branches: MAIN
CVS tags: pkgsrc-2017Q3-base,
pkgsrc-2017Q3,
pkgsrc-2017Q2-base,
pkgsrc-2017Q2,
pkgsrc-2017Q1-base,
pkgsrc-2017Q1
Diff to: previous 1.3: preferred, colored
Changes since revision 1.3: +2 -1
lines
Add missing include.
Revision 1.3: download - view: text, markup, annotated - select for diffs
Sat Dec 12 16:56:04 2015 UTC (9 years ago) by wiedi
Branches: MAIN
CVS tags: pkgsrc-2016Q4-base,
pkgsrc-2016Q4,
pkgsrc-2016Q3-base,
pkgsrc-2016Q3,
pkgsrc-2016Q2-base,
pkgsrc-2016Q2,
pkgsrc-2016Q1-base,
pkgsrc-2016Q1,
pkgsrc-2015Q4-base,
pkgsrc-2015Q4
Diff to: previous 1.2: preferred, colored
Changes since revision 1.2: +2 -1
lines
Fix int types and network libs on SunOS
Revision 1.2: download - view: text, markup, annotated - select for diffs
Mon Nov 2 18:42:20 2015 UTC (9 years, 1 month ago) by agc
Branches: MAIN
Diff to: previous 1.1: preferred, colored
Changes since revision 1.1: +2 -1
lines
Add SHA512 digests for distfiles for biology category.
Existing SHA1 digests verified, all found to be the same on the
machine holding the existing distfiles (morden). Existing SHA1
digests retained for now as an audit trail.
Revision 1.1: download - view: text, markup, annotated - select for diffs
Wed Oct 14 17:12:52 2015 UTC (9 years, 1 month ago) by leot
Branches: MAIN
Import biology/bwa as bwa-0.7.9a.
Packaged in pkgsrc-wip by Jason Bacon.
BWA is a software package for mapping low-divergent sequences against a large
reference genome, such as the human genome.
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