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CVS log for pkgsrc/biology/ad2vcf/PLIST

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Default branch: MAIN


Revision 1.6 / (download) - annotate - [select for diffs], Sat Jun 11 19:48:32 2022 UTC (5 months, 3 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2022Q3-base, pkgsrc-2022Q3, pkgsrc-2022Q2-base, pkgsrc-2022Q2, HEAD
Changes since 1.5: +0 -0 lines
Diff to previous 1.5 (colored)

biology/ad2vcf: Update to 0.1.6

Updates for bl_sam_t and bl_vcf_t API streamlining
Changes: https://github.com/auerlab/ad2vcf/releases

Revision 1.5 / (download) - annotate - [select for diffs], Tue Mar 15 21:08:32 2022 UTC (8 months, 3 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2022Q1-base, pkgsrc-2022Q1
Changes since 1.4: +0 -0 lines
Diff to previous 1.4 (colored)

biology/ad2vcf: Update to 0.1.5

Minor update for bioloibc 0.2.2 API changes

Revision 1.4 / (download) - annotate - [select for diffs], Tue Dec 14 19:02:21 2021 UTC (11 months, 3 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2021Q4-base, pkgsrc-2021Q4
Changes since 1.3: +0 -0 lines
Diff to previous 1.3 (colored)

biology/ad2vcf: Update to 0.1.4

Updates for evolving libxtend and biolibc APIs
Add --version flag
Filter out unused SAM fields on input
Numerous other minor fixes and enhancements

Changes: https://github.com/auerlab/ad2vcf/releases/tag/0.1.4

Revision 1.3 / (download) - annotate - [select for diffs], Sat Aug 28 18:39:10 2021 UTC (15 months, 1 week ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2021Q3-base, pkgsrc-2021Q3
Changes since 1.2: +0 -0 lines
Diff to previous 1.2 (colored)

biology/ad2vcf: Update to 0.1.3.31

Updates for libxtend and biolibc API changes
Clean up and minor bug fixes

Revision 1.2 / (download) - annotate - [select for diffs], Fri Jun 11 17:06:54 2021 UTC (17 months, 3 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2021Q2-base, pkgsrc-2021Q2
Changes since 1.1: +0 -0 lines
Diff to previous 1.1 (colored)

biology/ad2vcf: Update to 0.1.3

Updates for new biolibc API

Upstream change log: https://github.com/auerlab/ad2vcf/releases

Revision 1.1 / (download) - annotate - [select for diffs], Wed Mar 24 18:19:21 2021 UTC (20 months, 2 weeks ago) by bacon
Branch: MAIN
CVS Tags: pkgsrc-2021Q1-base, pkgsrc-2021Q1

biology/ad2vcf: import ad2vcf-0.1.2

ad2vdf extracts allelic depth info from a SAM stream and adds it to a
corresponding single-sample VCF file.

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